Variant Results

or

Results for "LINC01122"

Variant Events: 49

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

LINC01122

1-0882-003

chr2:
59348655-59348655

C

G

intergenic

De novo

-

Yuen2017 G

LINC01122

AU034904

chr2:
59035049-59035049

G

T

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

AU034904

chr2:
59035160-59035160

C

T

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

2-1173-003

chr2:
59209736-59209736

C

G

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

AU4079301

chr2:
59200218-59200218

T

A

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

2-1437-003

chr2:
59111781-59111781

C

A

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

AU1952305

chr2:
59055111-59055111

A

G

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

AU4197301

chr2:
58931278-58931278

T

C

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

2-0270-004

chr2:
59372574-59372574

A

G

intergenic

De novo

-

Yuen2017 G

LINC01122

2-1066-004

chr2:
59287957-59287957

T

C

ncRNA_exonic

De novo

-

Yuen2017 G

LINC01122

2-1182-003

chr2:
58978527-58978527

G

A

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

2-0296-003

chr2:
59230890-59230890

T

C

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

AU4310301

chr2:
58997577-58997580

GACA

GA

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

13874.p1

chr2:
58846016-58846016

T

C

ncRNA_intronic

De novo

-

Turner2016 G
Werling2018 G

LINC01122

1-0465-003

chr2:
58763607-58763607

C

A

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

AU031204

chr2:
59117803-59117803

A

G

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

2-1370-003

chr2:
58889643-58889643

A

G

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

5-0061-003

chr2:
59305006-59305007

TA

T

intergenic

De novo

-

Yuen2017 G

LINC01122

AU011704

chr2:
59145179-59145179

A

G

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

2-1116-003

chr2:
59128645-59128645

A

G

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

AU3779301

chr2:
59289982-59289982

T

C

ncRNA_exonic

De novo

-

Yuen2017 G

LINC01122

1-0046-003

chr2:
59221714-59221714

C

T

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

AU3907301

chr2:
58774506-58774506

T

G

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

2-1350-004

chr2:
59337830-59337830

C

G

intergenic

De novo

-

Yuen2017 G

LINC01122

12225.p1

chr2:
59102993-59102993

A

G

ncRNA_intronic

De novo

-

Wilfert2021 G

LINC01122

AU1725302

chr2:
59438462-59438467

ATTTTT

ATTTT

intergenic

De novo

-

Yuen2017 G

LINC01122

2-1408-003

chr2:
59125838-59125838

G

T

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

1-0885-003

chr2:
58800177-58800177

G

A

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

AU056804

chr2:
58979568-58979568

T

C

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

1-0201-005

chr2:
58876653-58876653

A

G

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

AU3122301

chr2:
58959567-58959567

G

C

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

12498.p1

chr2:
59261642-59261642

G

T

ncRNA_intronic

De novo

-

Turner2016 G

LINC01122

11194.p1

chr2:
59337627-59337627

G

A

intergenic

De novo

-

Turner2016 G

LINC01122

AU009805

chr2:
58968502-58968502

G

A

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

2-1143-003

chr2:
59003398-59003398

C

T

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

74-0117

chr2:
59145179-59145179

A

G

ncRNA_intronic

De novo

-

Michaelson2012 G

LINC01122

AU026412

chr2:
58859731-58859731

C

T

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

74-0688

chr2:
58923309-58923309

T

C

ncRNA_intronic

De novo

-

Michaelson2012 G

LINC01122

2-1267-003

chr2:
58796853-58796853

C

T

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

1-0339-004

chr2:
59134521-59134521

A

G

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

AU4462302

chr2:
59011934-59011934

C

G

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

AU3790302

chr2:
59016854-59016854

A

G

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

AU036203

chr2:
59365724-59365724

C

T

intergenic

De novo

-

Yuen2017 G

LINC01122

1-0465-003a

chr2:
58763607-58763607

C

A

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

1-0208-003

chr2:
59387968-59387968

A

G

intergenic

De novo

-

Yuen2017 G

LINC01122

1-0572-003

chr2:
59352688-59352688

C

G

intergenic

De novo

-

Yuen2017 G

LINC01122

2-0116-005

chr2:
58748619-58748619

T

C

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

2-1411-003

chr2:
58784872-58784886

TACACACACACACAC

TACACACACACAC

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01122

7-0135-003

chr2:
59418860-59418860

A

G

intergenic

De novo

-

Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
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