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Results for "GPNMB"

Variant Events: 7

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
GPNMB     2-1212-003chr7:
23300164-23300164
GAexonicDe novononsynonymous SNVNM_001005340
NM_002510
c.G790A
c.G790A
p.D264N
p.D264N
9.442-Yuen2017 G
GPNMB     AU4496301chr7:
23311096-23311119
AAAACAAACAAACAAACAAACAAAAAAACAAACAAACAAACAAAintronicDe novo--Yuen2017 G
GPNMB     AU1542301chr7:
23305534-23305534
TCintronicDe novo--Yuen2017 G
GPNMB     12913.p1chr7:
23296615-23296615
GAexonicMosaicnonsynonymous SNVNM_001005340
NM_002510
c.G472A
c.G472A
p.D158N
p.D158N
34.0-Dou2017 E
Krupp2017 E
GPNMB     2-1406-003chr7:
23318182-23318182
ATintergenicDe novo--Yuen2016 G
Yuen2017 G
GPNMB     A26chr7:
23310684-23310684
GCintronicDe novo--Wu2018 G
GPNMB     AU3984302chr7:
23309462-23309462
GAintronicDe novo--Yuen2017 G
Source Variant Information

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Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
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