Variant Results

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Results for "Cherot2017"

Variant Events: 4

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported
ADNP	Cherot2017:1	chr20: 49510578-49510578	G	A	exonic		Unknown	stopgain	NM_001282532 NM_181442 NM_015339 NM_001282531	c.C673T c.C673T c.C673T c.C673T	p.R225X p.R225X p.R225X p.R225X	39.0	-	Cherot2017 E
FOXP1	Cherot2017:2	chr3: 71026977-71026977	A	G	splicing		Unknown	splicing				22.0	-	Cherot2017 E
IQSEC2	Cherot2017:3	chrX: 53272549-53272549	G	A	exonic		Unknown	stopgain	NM_001111125 NM_015075	c.C2854T c.C2239T	p.Q952X p.Q747X	40.0	-	Cherot2017 E
SCN2A	Cherot2017:4	chr2: 166231381-166231383	AAA	A	exonic		Unknown	frameshift deletion	NM_001040143 NM_001040142 NM_021007	c.4160_4161del c.4160_4161del c.4160_4161del	p.K1387fs p.K1387fs p.K1387fs	-	-	Cherot2017 E

Source Variant Information

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Paper Information

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Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
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