Variant Results

or

or

Results for "GMPS"

Variant Events: 18

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

GMPS

AU2863302

chr3:
155820115-155820115

T

C

intergenic

De novo

-

-

Yuen2017 G

GMPS

11843-1

chr3:
155588432-155588433

CG

C

UTR5

De novo

-

-

Fu2022 E

GMPS

7-0219-003

chr3:
155800624-155800624

A

G

intergenic

De novo

-

-

Yuen2017 G

GMPS

AU2089301

chr3:
155770883-155770883

G

A

intergenic

De novo

-

-

Yuen2017 G

GMPS

2-1397-003

chr3:
155801333-155801333

G

A

intergenic

De novo

-

-

Yuen2017 G

GMPS

AU024004

chr3:
155811720-155811720

A

G

intergenic

De novo

-

-

Yuen2017 G

GMPS

AU3849302

chr3:
155698526-155698526

G

A

intergenic

De novo

-

-

Yuen2017 G

GMPS

SP0151015

chr3:
155633832-155633838

ATGAACT

A

exonic

De novo

nonframeshift deletion

NM_003875

c.1064_1069del

p.355_357del

-

-

Fu2022 E
Trost2022 G

GMPS

SP0099685

chr3:
155629040-155629040

C

A

exonic

De novo

synonymous SNV

NM_003875

c.C858A

p.A286A

-

-

Fu2022 E
Trost2022 G
Zhou2022 GE

GMPS

MT_189.3

chr3:
155594673-155594673

C

T

intronic

De novo

-

-

Trost2022 G

GMPS

3-0309-000

chr3:
155615774-155615774

G

T

exonic

De novo

nonsynonymous SNV

NM_003875

c.G268T

p.D90Y

29.0

-

Tammimies2015 E
Trost2022 G
Zhou2022 GE

GMPS

SP0151016

chr3:
155633832-155633838

ATGAACT

A

exonic

De novo

nonframeshift deletion

NM_003875

c.1064_1069del

p.355_357del

-

-

Fu2022 E

GMPS

5-1042-003

chr3:
155638143-155638143

C

T

intronic

De novo

-

-

Trost2022 G

GMPS

AU4246304

chr3:
155759744-155759744

T

C

intergenic

De novo

-

-

Yuen2017 G

GMPS

1-1179-003

chr3:
155589494-155589494

C

A

intronic

De novo

-

-

Trost2022 G

GMPS

20-0808479-16

chr3:
155628654-155628654

G

A

exonic

De novo

nonsynonymous SNV

NM_003875

c.G700A

p.V234I

28.8

Fu2022 E
Satterstrom2020 E
Trost2022 G
Zhou2022 GE

GMPS

1-0144-004

chr3:
155623041-155623041

C

T

intronic

De novo

-

-

Trost2022 G
Yuen2017 G

GMPS

1-0338-003

chr3:
155724355-155724355

G

A

intergenic

De novo

-

-

Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
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