Variant Results

or

or

Results for "CDH9"

Variant Events: 31

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

CDH9

AU2000305

chr5:
26989870-26989870

A

C

intronic

De novo

-

-

Yuen2017 G

CDH9

2-1629-003

chr5:
27101880-27101884

CAGAG

CAG

intergenic

De novo

-

-

Yuen2017 G

CDH9

2-1741-003

chr5:
27092913-27092913

C

T

intergenic

De novo

-

-

Yuen2017 G

CDH9

5-0140-003

chr5:
27015305-27015306

AC

A

intronic

De novo

-

-

Yuen2017 G

CDH9

AU4237301

chr5:
27087983-27087983

T

G

intergenic

De novo

-

-

Yuen2017 G

CDH9

5-0004-003

chr5:
26893234-26893239

TTAATC

T

intronic

De novo

-

-

Yuen2017 G

CDH9

AU065807

chr5:
26908768-26908768

G

T

intronic

De novo

-

-

Yuen2017 G

CDH9

3-0434-000

chr5:
27276400-27276400

T

C

intergenic

De novo

-

-

Yuen2016 G
Yuen2017 G

CDH9

1-0253-005

chr5:
27251032-27251035

AGGT

A

intergenic

De novo

-

-

Yuen2017 G

CDH9

1-0489-003

chr5:
27240379-27240379

A

G

intergenic

De novo

-

-

Yuen2016 G
Yuen2017 G

CDH9

2-1719-003

chr5:
27134798-27134798

G

T

intergenic

De novo

-

-

Yuen2017 G

CDH9

2-1235-004

chr5:
27237549-27237549

T

C

intergenic

De novo

-

-

Yuen2017 G

CDH9

2-0503-003

chr5:
27073332-27073332

G

A

intergenic

De novo

-

-

Yuen2017 G

CDH9

2-1735-003

chr5:
26946171-26946171

T

A

intronic

De novo

-

-

Yuen2017 G

CDH9

1-0113-003

chr5:
26900853-26900853

T

G

intronic

De novo

-

-

Yuen2016 G

CDH9

AU2162302

chr5:
27175435-27175435

C

T

intergenic

De novo

-

-

Yuen2017 G

CDH9

2-0300-004

chr5:
27069467-27069467

C

T

intergenic

De novo

-

-

Yuen2017 G

CDH9

14642.p1

chr5:
26884240-26884240

T

C

intronic

De novo

-

-

Turner2016 G

CDH9

AU2495302

chr5:
26896649-26896649

C

A

intronic

De novo

-

-

Yuen2017 G

CDH9

1-1004-003

chr5:
27322840-27322840

A

G

intergenic

De novo

-

-

Yuen2017 G

CDH9

AU1223303

chr5:
27258004-27258004

T

C

intergenic

De novo

-

-

Yuen2017 G

CDH9

1-0325-003

chr5:
27212028-27212028

G

T

intergenic

De novo

-

-

Yuen2017 G

CDH9

5-0055-004

chr5:
26934107-26934107

A

T

intronic

De novo

-

-

Yuen2017 G

CDH9

1-0007-003

chr5:
27426673-27426673

G

A

intergenic

De novo

-

-

Yuen2017 G

CDH9

Cukier2014:17351

chr5:
26885797-26885797

T

C

exonic

Unknown

nonsynonymous SNV

NM_016279

c.A1808G

p.E603G

20.2

Cukier2014 E

CDH9

AU4159302

chr5:
26909163-26909163

C

T

intronic

De novo

-

-

Yuen2017 G

CDH9

5-0074-003

chr5:
27204981-27204981

C

T

intergenic

De novo

-

-

Yuen2017 G

CDH9

2-0503-004

chr5:
27073332-27073332

G

A

intergenic

De novo

-

-

Yuen2017 G

CDH9

2-0102-004

chr5:
27038862-27038862

G

A

upstream

De novo

-

-

Yuen2017 G

CDH9

5-0114-003

chr5:
27291288-27291288

T

C

intergenic

De novo

-

-

Yuen2017 G

CDH9

AU3937301

chr5:
27439224-27439224

C

T

intergenic

De novo

-

-

Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
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