Variant Results

or

or

Results for "HSPA9"

Variant Events: 19

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

HSPA9

2-1206-003

chr5:
137900279-137900279

G

A

intronic

De novo

-

-

Yuen2016 G
Yuen2017 G

HSPA9

iHART1912

chr5:
137902403-137902405

CCT

C

exonic

Maternal

frameshift deletion

NM_004134

c.882_883del

p.T294fs

-

Ruzzo2019 G

HSPA9

iHART1910

chr5:
137902403-137902405

CCT

C

exonic

Maternal

frameshift deletion

NM_004134

c.882_883del

p.T294fs

-

Ruzzo2019 G

HSPA9

2-0045-003

chr5:
137944988-137944988

G

A

intergenic

De novo

-

-

Yuen2016 G
Yuen2017 G

HSPA9

SP0055968

chr5:
137906688-137906688

A

G

exonic

De novo

nonsynonymous SNV

NM_004134

c.T371C

p.I124T

18.78

-

Fu2022 E

HSPA9

AU2569301

chr5:
137904999-137904999

G

A

intronic

De novo

-

-

Yuen2017 G

HSPA9

2-0028-003

chr5:
138058477-138058477

C

T

intergenic

De novo

-

-

Yuen2017 G

HSPA9

SP0073832

chr5:
137910945-137910945

A

C

exonic

De novo

synonymous SNV

NM_004134

c.T63G

p.P21P

-

-

Fu2022 E

HSPA9

2-1406-003

Complex Event; expand row to view variants

De novo

-

-

Yuen2016 G
Yuen2017 G

HSPA9

2-1134-003

chr5:
137919300-137919300

G

A

intergenic

De novo

-

-

Yuen2017 G

HSPA9

1-0067-005

chr5:
137897208-137897208

T

C

intronic

De novo

-

-

Yuen2017 G

HSPA9

1-0222-003

chr5:
137979989-137979989

T

C

intergenic

De novo

-

-

Yuen2017 G

HSPA9

2-1339-003

chr5:
137966094-137966094

G

A

intergenic

De novo

-

-

Yuen2017 G

HSPA9

AU3052302

chr5:
137899462-137899462

G

A

intronic

De novo

-

-

Yuen2017 G

HSPA9

AU3906301

chr5:
137892276-137892276

G

A

exonic

De novo

synonymous SNV

NM_004134

c.C1827T

p.N609N

-

-

Yuen2017 G

HSPA9

AU4235302

chr5:
137958520-137958520

C

G

intergenic

De novo

-

-

Yuen2017 G

HSPA9

2-1335-004

chr5:
138012275-138012275

T

A

intergenic

De novo

-

-

Yuen2017 G

HSPA9

1-0067-004

chr5:
137918667-137918667

T

G

intergenic

De novo

-

-

Yuen2017 G

HSPA9

1-0715-003

chr5:
137924580-137924580

C

T

intergenic

De novo

-

-

Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
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