or
or
Exact

Results for "PATJ"

Variant Events: 87

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
PATJ     2-1154-003chr1:
62658407-62658407
TGintergenicDe novo--Yuen2017 G
PATJ     1-0458-003chr1:
62624277-62624277
CAintronicDe novo--Yuen2017 G
PATJ     1-0144-004chr1:
62655471-62655471
CTintergenicDe novo--Yuen2017 G
PATJ     MT_57.3chr1:
62222390-62222390
AGintronicDe novo--Trost2022 G
PATJ     MSSNG00378-003chr1:
62219908-62219908
TCintronicDe novo--Trost2022 G
PATJ     MSSNG00383-003chr1:
62262698-62262698
CTintronicDe novo--Trost2022 G
PATJ     3-0662-000chr1:
62261091-62261091
GTintronicDe novo-1.0E-4Trost2022 G
PATJ     AU2089302chr1:
62585855-62585855
GAintronicDe novo--Trost2022 G
Yuen2017 G
PATJ     MSSNG00242-003chr1:
62464579-62464579
AGintronicDe novo--Trost2022 G
PATJ     7-0361-003chr1:
62348849-62348849
TCintronicDe novo--Trost2022 G
PATJ     2-0103-004chr1:
62490225-62490225
GGGATintronicDe novo--Trost2022 G
PATJ     1-0611-003chr1:
62476647-62476647
ACintronicDe novo--Trost2022 G
PATJ     2-1753-003chr1:
62291389-62291389
TCintronicDe novo--Trost2022 G
PATJ     PN400341chr1:
62574145-62574145
GCexonicUnknownnonsynonymous SNVNM_176877c.G4414Cp.A1472P29.92.498E-5Leblond2019 E
PATJ     MSSNG00438-003chr1:
62279183-62279183
TCintronicDe novo--Trost2022 G
PATJ     7-0408-003chr1:
62331764-62331764
CTintronicDe novo--Trost2022 G
PATJ     5-2005-003chr1:
62302454-62302454
CTintronicDe novo--Trost2022 G
PATJ     7-0024-003chr1:
62575092-62575093
GGCTintronicDe novo--Trost2022 G
PATJ     3-0475-000chr1:
62570613-62570613
CTintronicDe novo--Trost2022 G
PATJ     mAGRE1754chr1:
62614060-62614064
AGAGTAexonicPaternalframeshift deletionNM_176877c.5377_5378delp.E1793fs-4.969E-5Cirnigliaro2023 G
PATJ     2-1086-004chr1:
62602478-62602478
GCintronicDe novo--Trost2022 G
PATJ     mAGRE1751chr1:
62614060-62614064
AGAGTAexonicPaternalframeshift deletionNM_176877c.5377_5378delp.E1793fs-4.969E-5Cirnigliaro2023 G
PATJ     2-1086-004chr1:
62602474-62602474
TTCintronicDe novo--Trost2022 G
PATJ     AU3368303chr1:
62550218-62550219
CGCexonicPaternalframeshift deletionNM_176877c.4276delGp.A1426fs--Cirnigliaro2023 G
PATJ     MSSNG00421-004chr1:
62497156-62497156
GTintronicDe novo--Trost2022 G
PATJ     AU3368302chr1:
62550218-62550219
CGCexonicPaternalframeshift deletionNM_176877c.4276delGp.A1426fs--Cirnigliaro2023 G
PATJ     5-5146-003chr1:
62494820-62494820
TCintronicDe novo--Trost2022 G
PATJ     mAGRE1912chr1:
62366953-62366953
GAsplicingPaternalsplicing23.08.667E-6Cirnigliaro2023 G
PATJ     1-0630-003chr1:
62548795-62548795
CCGTTintronicDe novo--Trost2022 G
PATJ     mAGRE2411chr1:
62241004-62241004
CTexonicMaternalstopgainNM_176877c.C847Tp.R283X39.08.27E-6Cirnigliaro2023 G
PATJ     7-0141-003chr1:
62588653-62588653
TGintronicDe novo--Trost2022 G
Yuen2017 G
PATJ     3-0795-000chr1:
62503355-62503355
TGintronicDe novo--Trost2022 G
PATJ     3-0515-000chr1:
62624235-62624235
TCintronicDe novo--Trost2022 G
PATJ     AU3786301 Complex Event; expand row to view variants  De novo--Trost2022 G
Yuen2017 G
PATJ     AU057503chr1:
62624130-62624130
AGintronicDe novo--Trost2022 G
PATJ     3-0515-000chr1:
62624249-62624250
CATGintronicDe novo--Trost2022 G
PATJ     1-0289-003chr1:
62624235-62624235
TCintronicDe novo--Trost2022 G
PATJ     5-0055-004chr1:
62623380-62623381
CCGTintronicDe novo--Trost2022 G
PATJ     5-0055-004chr1:
62623374-62623375
GTACintronicDe novo--Trost2022 G
PATJ     5-0055-004chr1:
62623389-62623389
GAintronicDe novo--Trost2022 G
PATJ     5-0055-004chr1:
62623385-62623385
CAintronicDe novo--Trost2022 G
PATJ     1-0197-004chr1:
62657831-62657831
TCintergenicDe novo--Yuen2017 G
PATJ     1-0289-003chr1:
62624249-62624250
CATGintronicDe novo--Trost2022 G
PATJ     2-1168-003chr1:
62445134-62445134
GAintronicDe novo--Yuen2017 G
PATJ     1-0332-003chr1:
62624249-62624250
CATGintronicDe novo--Trost2022 G
PATJ     2-1339-003chr1:
62624254-62624256
GTGATAintronicDe novo--Trost2022 G
PATJ     Cukier2014:17122chr1:
62582847-62582847
CGexonicUnknownnonsynonymous SNVNM_176877c.C4847Gp.A1616G18.620.013Cukier2014 E
PATJ     1-0337-003chr1:
62624249-62624250
CATGintronicDe novo--Trost2022 G
PATJ     2-1562-004chr1:
62624249-62624250
CATGintronicDe novo--Trost2022 G
PATJ     2-1562-003chr1:
62624249-62624250
CATGintronicDe novo--Trost2022 G
PATJ     2-0144-004chr1:
62624249-62624250
CATGintronicDe novo--Trost2022 G
PATJ     1-0329-004chr1:
62624249-62624250
CATGintronicDe novo--Trost2022 G
PATJ     5-0015-004chr1:
62624254-62624256
GTGATAintronicDe novo--Trost2022 G
PATJ     11490.p1chr1:
62327208-62327208
GTintronicDe novo--Krumm2015 E
PATJ     1-0289-003chr1:
62624254-62624256
GTGATAintronicDe novo--Trost2022 G
PATJ     2-0144-004chr1:
62624307-62624310
GGTGCGCTintronicDe novo--Trost2022 G
PATJ     1-0329-004chr1:
62624307-62624310
GGTGCGCTintronicDe novo--Trost2022 G
PATJ     1-0329-004chr1:
62624254-62624256
GTGATAintronicDe novo--Trost2022 G
PATJ     2-1562-004chr1:
62624254-62624256
GTGATAintronicDe novo--Trost2022 G
PATJ     1-0332-003chr1:
62624254-62624256
GTGATAintronicDe novo--Trost2022 G
PATJ     2-0144-004chr1:
62624254-62624256
GTGATAintronicDe novo--Trost2022 G
PATJ     AU3053302chr1:
62378948-62378948
CGintronicDe novo--Trost2022 G
Yuen2017 G
PATJ     SP0044098chr1:
62374032-62374032
TGintronicDe novo--Fu2022 E
PATJ     SP0034904chr1:
62588733-62588733
AGintronicDe novo--Fu2022 E
Zhou2022 GE
PATJ     AU0636303chr1:
62325251-62325251
TCintronicDe novo--Trost2022 G
Yuen2017 G
PATJ     SP0078543chr1:
62614103-62614103
CAintronicDe novo--Fu2022 E
PATJ     2-1347-003chr1:
62624307-62624310
GGTGCGCTintronicDe novo--Trost2022 G
PATJ     1-0219-003chr1:
62291136-62291136
AGintronicDe novo--Trost2022 G
Yuen2017 G
PATJ     2-0142-004chr1:
62624307-62624310
GGTGCGCTintronicDe novo--Trost2022 G
PATJ     2-1347-003chr1:
62624317-62624319
GGCTGAintronicDe novo--Trost2022 G
PATJ     2-0142-004chr1:
62624317-62624319
GGCTGAintronicDe novo--Trost2022 G
PATJ     1-0079-008chr1:
62535179-62535179
GAintronicDe novo--Trost2022 G
Yuen2017 G
PATJ     Kenny2014:1chr1:
62321741-62321742
TCTexonicUnknownframeshift deletionNM_176877c.2153delCp.S718fs--Kenny2014 T
PATJ     1-0007-003chr1:
62604323-62604323
CTintronicDe novo--Trost2022 G
Yuen2017 G
PATJ     5111007080051-Cchr1:
62232230-62232230
CTintronicDe novo--Fu2022 E
PATJ     AU2569301chr1:
62579917-62579917
CTexonicDe novostopgainNM_176877c.C4654Tp.R1552X44.05.012E-5Trost2022 G
Yuen2017 G
Zhou2022 GE
PATJ     11402.p1chr1:
62374072-62374072
CTexonicMosaicnonsynonymous SNVNM_176877c.C3410Tp.S1137L19.79-Dou2017 E
PATJ     5-0055-003chr1:
62228363-62228363
GTintronicDe novo--Trost2022 G
Yuen2017 G
PATJ     AU003403chr1:
62311337-62311337
AGintronicDe novo--Yuen2017 G
PATJ     1-0551-004chr1:
62561747-62561747
AGintronicDe novo--Trost2022 G
Yuen2017 G
PATJ     1-0261-004chr1:
62596547-62596547
CTintronicDe novo--Trost2022 G
Yuen2017 G
PATJ     1-0169-003chr1:
62499320-62499320
ACintronicDe novo--Trost2022 G
Yuen2017 G
PATJ     iHART1751chr1:
62614060-62614064
AGAGTAexonicPaternalframeshift deletionNM_176877c.5377_5378delp.E1793fs-4.969E-5Ruzzo2019 G
PATJ     AU4327303chr1:
62656499-62656503
CCTCTCCTintergenicDe novo--Yuen2017 G
PATJ     iHART1912chr1:
62366953-62366953
GAsplicingPaternalsplicing23.08.667E-6Ruzzo2019 G
PATJ     iHART1754chr1:
62614060-62614064
AGAGTAexonicPaternalframeshift deletionNM_176877c.5377_5378delp.E1793fs-4.969E-5Ruzzo2019 G
PATJ     iHART2411chr1:
62241004-62241004
CTexonicMaternalstopgainNM_176877c.C847Tp.R283X39.08.27E-6Ruzzo2019 G
Source Variant Information

, -

Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
More