Variant Results

or

Results for "LINC01031"

Variant Events: 92

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

LINC01031

AU066403

chr1:
194352446-194352446

C

A

intergenic

De novo

-

Yuen2017 G

LINC01031

AU2458303

chr1:
193620640-193620640

A

T

intergenic

De novo

-

Yuen2017 G

LINC01031

AU3862305

chr1:
194976704-194976704

A

T

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1313-003

chr1:
193324003-193324009

TCATTTG

T

ncRNA_intronic

De novo

-

Yuen2016 G

LINC01031

2-0012-004

chr1:
194988479-194988479

T

G

intergenic

De novo

-

Yuen2017 G

LINC01031

AU059903

chr1:
193825865-193825880

TACACACACACACACA

TACACACACACACA

intergenic

De novo

-

Yuen2017 G

LINC01031

AU1987302

chr1:
194818819-194818819

G

A

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0990-003

chr1:
194864746-194864746

G

T

intergenic

De novo

-

Yuen2017 G

LINC01031

A28

chr1:
193406714-193406714

C

T

intergenic

De novo

-

Wu2018 G

LINC01031

7-0067-003

chr1:
195125979-195125979

A

C

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0465-003

chr1:
194964786-194964786

T

C

intergenic

De novo

-

Yuen2017 G

LINC01031

AU4273304

chr1:
193978052-193978052

C

T

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0285-004

chr1:
193708733-193708733

A

C

intergenic

De novo

-

Yuen2017 G

LINC01031

AU060803

chr1:
194191885-194191885

C

T

intergenic

De novo

-

Yuen2017 G

LINC01031

AU3782302

chr1:
195397778-195397778

G

T

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0261-003

chr1:
194025326-194025326

A

T

intergenic

De novo

-

Yuen2017 G

LINC01031

AU076808

chr1:
193628027-193628027

G

C

intergenic

De novo

-

Yuen2017 G

LINC01031

AU3811305

chr1:
193855249-193855249

A

T

intergenic

De novo

-

Yuen2017 G

LINC01031

AU076808

chr1:
194868648-194868648

T

G

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0546-003

chr1:
193716154-193716154

A

G

intergenic

De novo

-

Yuen2017 G

LINC01031

AU4235301

chr1:
193296643-193296643

T

C

ncRNA_intronic

De novo

-

Yuen2017 G

LINC01031

AU054304

chr1:
194877245-194877245

G

A

intergenic

De novo

-

Yuen2017 G

LINC01031

AU4029302

chr1:
194631452-194631452

G

A

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1341-004

chr1:
194529031-194529031

A

ACTCCTGACTCGAT

intergenic

De novo

-

Yuen2017 G

LINC01031

5-0088-003

chr1:
193660933-193660933

G

C

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0233-004

chr1:
195143074-195143075

AT

A

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0455-004

chr1:
194479760-194479760

C

T

intergenic

De novo

-

Yuen2017 G

LINC01031

AU4263304

chr1:
193619630-193619630

T

C

intergenic

De novo

-

Yuen2017 G

LINC01031

5-0105-003

chr1:
195047221-195047221

C

T

intergenic

De novo

-

Yuen2017 G

LINC01031

AU3729303

chr1:
193620961-193620961

G

A

intergenic

De novo

-

Yuen2017 G

LINC01031

A10

chr1:
194896100-194896100

A

G

intergenic

De novo

-

Wu2018 G

LINC01031

12175.p1

chr1:
194226359-194226359

T

G

intergenic

De novo

-

Turner2016 G

LINC01031

1-0560-003

chr1:
193535776-193535776

G

A

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1066-003

chr1:
193910632-193910632

A

C

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1266-003

chr1:
195002258-195002263

CTTTTT

CTTTT

intergenic

De novo

-

Yuen2017 G

LINC01031

AU1725306

chr1:
193789345-193789345

T

C

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1336-004

chr1:
194536508-194536508

G

A

intergenic

De novo

-

Yuen2017 G

LINC01031

AU072504

chr1:
193434797-193434797

A

G

intergenic

De novo

-

Yuen2017 G

LINC01031

AU3786301

chr1:
193662338-193662338

T

C

intergenic

De novo

-

Yuen2017 G

LINC01031

5-0015-004

chr1:
194554729-194554729

A

G

intergenic

De novo

-

Yuen2017 G

LINC01031

AU2165301

chr1:
193386130-193386137

GCCCCCCC

GCCCCCCCC

intergenic

De novo

-

Yuen2017 G

LINC01031

AU4015303

chr1:
194429811-194429811

A

G

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0344-003

chr1:
194073158-194073158

G

A

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0344-003

chr1:
193609206-193609206

T

C

intergenic

De novo

-

Yuen2017 G

LINC01031

3-0439-000

chr1:
193671776-193671776

A

G

intergenic

De novo

-

Yuen2016 G

LINC01031

2-1363-003

chr1:
195145365-195145365

C

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC01031

AU030804

chr1:
194544839-194544839

A

T

intergenic

De novo

-

Yuen2017 G

LINC01031

AU1795301

chr1:
194688968-194688968

T

A

intergenic

De novo

-

Yuen2017 G

LINC01031

AU3506303

chr1:
193748563-193748570

CACTTTAA

C

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1291-003

Complex Event; expand row to view variants

De novo

-

Yuen2016 G
Yuen2017 G

LINC01031

1-0901-003

chr1:
193968313-193968313

A

G

intergenic

De novo

-

Yuen2017 G

LINC01031

AU3891303

chr1:
193461883-193461883

G

A

intergenic

De novo

-

Yuen2017 G

LINC01031

7-0148-003

chr1:
194512336-194512336

G

A

intergenic

De novo

-

Yuen2017 G

LINC01031

AU3951301

chr1:
194029508-194029508

C

T

intergenic

De novo

-

Yuen2017 G

LINC01031

AU4056302

chr1:
193834119-193834119

G

A

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0756-005

chr1:
194858850-194858850

T

A

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1718-003

chr1:
193428551-193428551

C

T

intergenic

De novo

-

Yuen2017 G

LINC01031

AU4056302

chr1:
195080840-195080840

C

T

intergenic

De novo

-

Yuen2017 G

LINC01031

AU4378301

chr1:
194983034-194983034

C

T

intergenic

De novo

-

Yuen2017 G

LINC01031

11368.p1

chr1:
194122116-194122117

AT

A

intergenic

De novo

-

Krumm2015 E

LINC01031

7-0194-003

chr1:
194646319-194646319

C

A

intergenic

De novo

-

Yuen2017 G

LINC01031

AU3727302

chr1:
193352695-193352695

A

G

intergenic

De novo

-

Yuen2017 G

LINC01031

14670.p1

chr1:
194122292-194122292

A

G

intergenic

De novo

-

Krumm2015 E

LINC01031

AU2109301

chr1:
195147659-195147659

T

C

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0265-004

chr1:
195216554-195216554

A

G

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1514-003

chr1:
194553400-194553400

C

T

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1127-003

chr1:
193682212-193682212

A

G

intergenic

De novo

-

Yuen2016 G

LINC01031

2-1365-003

chr1:
195352375-195352375

G

A

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC01031

7-0068-003

chr1:
193566510-193566510

T

A

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1180-003

chr1:
194244810-194244810

A

G

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC01031

AU3984301

chr1:
193738362-193738362

C

T

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0402-004

chr1:
195243533-195243533

C

T

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1269-003

chr1:
193498061-193498061

T

C

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC01031

AU3937301

chr1:
193696316-193696316

A

G

intergenic

De novo

-

Yuen2017 G

LINC01031

A21

chr1:
195361299-195361299

C

T

intergenic

De novo

-

Wu2018 G

LINC01031

5-0140-003

chr1:
193603675-193603679

CAGAG

CAG

intergenic

De novo

-

Yuen2017 G

LINC01031

AU3638302

chr1:
194622625-194622625

C

A

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1308-003

chr1:
194760921-194760921

C

A

intergenic

De novo

-

Yuen2017 G

LINC01031

AU4028302

chr1:
193537211-193537211

A

G

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0206-003

chr1:
194792428-194792429

TA

T

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1251-003

chr1:
193583099-193583099

G

A

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0265-003

chr1:
195216554-195216554

A

G

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1409-003

chr1:
194333840-194333840

T

C

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC01031

AU030703

chr1:
195387174-195387174

T

A

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0551-004

chr1:
195379571-195379571

C

A

intergenic

De novo

-

Yuen2017 G

LINC01031

2-0116-005

chr1:
193958528-193958528

C

G

intergenic

De novo

-

Yuen2017 G

LINC01031

2-0116-005

chr1:
193555086-193555086

A

C

intergenic

De novo

-

Yuen2017 G

LINC01031

2-1163-003

chr1:
195307127-195307127

T

C

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC01031

2-1342-003

chr1:
194822296-194822296

T

C

intergenic

De novo

-

Yuen2017 G

LINC01031

AU038703

chr1:
194903217-194903217

C

T

intergenic

De novo

-

Yuen2017 G

LINC01031

AU3076302

chr1:
193367630-193367630

T

A

intergenic

De novo

-

Yuen2017 G

LINC01031

1-0481-003

chr1:
194442025-194442025

C

T

intergenic

De novo

-

Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
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