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Results for "TXK"

Variant Events: 13

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
TXK     mAGRE4519chr4:
48076067-48076067
GTexonicMaternalstopgainNM_003328c.C1242Ap.Y414X11.98-Cirnigliaro2023 G
TXK     1-0253-005chr4:
48126519-48126519
TCintronicDe novo--Trost2022 G
Yuen2017 G
TXK     1-0882-003chr4:
48098906-48098906
ATintronicDe novo--Trost2022 G
Yuen2017 G
TXK     SP0002657chr4:
48116418-48116418
AGexonicDe novosynonymous SNVNM_003328c.T18Cp.Y6Y--Feliciano2019 E
Fu2022 E
Trost2022 G
Zhou2022 GE
TXK     2-0210-005chr4:
48071071-48071074
ACATTGTGAGGAGCintronicDe novo--Trost2022 G
TXK     1-1174-003chr4:
48129174-48129174
CGintronicDe novo--Trost2022 G
TXK     2-1105-003chr4:
48131897-48131897
GAintronicDe novo--Trost2022 G
Yuen2016 G
Yuen2017 G
TXK     REACH000189chr4:
48122260-48122262
GTAGintronicDe novo--Trost2022 G
TXK     1-0075-003chr4:
48122344-48122346
CGTCintronicDe novo--Trost2022 G
TXK     2-1238-003chr4:
48112292-48112292
TAintronicDe novo--Trost2022 G
TXK     1-0010-003chr4:
48112292-48112292
TAintronicDe novo--Trost2022 G
TXK     SP0225202chr4:
48082114-48082114
AGexonicDe novononsynonymous SNVNM_003328c.T988Cp.Y330H17.63-Trost2022 G
TXK     3-0091-000chr4:
48101984-48101984
GCintronicDe novo--Trost2022 G
Source Variant Information

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Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
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