Variant Results

or

Results for "ANTXR1"

Variant Events: 40

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

ANTXR1

1-0804-003

Complex Event; expand row to view variants

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

2-1753-003

chr2:
69465093-69465093

A

T

intronic

De novo

-

Trost2022 G

ANTXR1

MSSNG00098-004

chr2:
69437014-69437014

G

A

intronic

De novo

-

Trost2022 G

ANTXR1

AU005214

chr2:
69330588-69330588

T

C

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

MSSNG00142-003

chr2:
69450180-69450180

C

T

intronic

De novo

-

Trost2022 G

ANTXR1

AU3695303

chr2:
69287299-69287299

C

G

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

4-0073-003

chr2:
69418612-69418612

T

C

intronic

De novo

-

Trost2022 G

ANTXR1

AU4145303

chr2:
69448642-69448642

A

T

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

SP0034274

chr2:
69420547-69420547

G

A

exonic

De novo

synonymous SNV

NM_032208

c.G1434A

p.T478T

-

4.942E-5

Trost2022 G

ANTXR1

2-0215-003

chr2:
69317302-69317302

G

C

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

2-1375-003

chr2:
69539680-69539680

A

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

ANTXR1

AU3811301

chr2:
69344538-69344538

A

C

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

2-1185-003

chr2:
69464802-69464802

G

A

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

A20

chr2:
69441831-69441831

G

A

intronic

De novo

-

Wu2018 G

ANTXR1

1-0841-003

chr2:
69310113-69310113

C

G

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

10C101202

chr2:
69409650-69409650

C

T

exonic

De novo

nonsynonymous SNV

NM_032208

c.C1211T

p.T404I

19.24

-

DeRubeis2014 E
Fu2022 E
Kosmicki2017 E
Lim2017 E
Neale2012 E
Satterstrom2020 E
Trost2022 G
Zhou2022 GE

ANTXR1

AU3646301

chr2:
69528805-69528805

G

A

intergenic

De novo

-

Yuen2017 G

ANTXR1

2-1581-003

chr2:
69372959-69372959

A

G

UTR3

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

2-1715-003

chr2:
69470507-69470507

T

C

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

1-0485-003

chr2:
69346314-69346314

C

T

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

14482.p1

chr2:
69306651-69306651

T

A

intronic

De novo

-

Turner2016 G

ANTXR1

2-1426-003

chr2:
69409213-69409213

T

C

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

AU2117302

chr2:
69299745-69299745

G

A

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

AU3874303

chr2:
69340611-69340611

A

C

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

AU3874303

chr2:
69340613-69340613

A

G

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

1-0150-003

chr2:
69249683-69249683

A

G

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

1-0338-005

chr2:
69364084-69364084

A

G

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

MSSNG00339-004

chr2:
69249551-69249551

T

G

intronic

De novo

-

Trost2022 G

ANTXR1

7-0295-003

chr2:
69249954-69249954

G

A

intronic

De novo

-

Trost2022 G

ANTXR1

2-1451-003

chr2:
69241706-69241707

AC

A

intronic

De novo

-

Trost2022 G

ANTXR1

AU4496301

chr2:
69262353-69262353

G

A

intronic

De novo

-

Trost2022 G
Yuen2017 G

ANTXR1

AU3794302

chr2:
69489104-69489104

C

T

intergenic

De novo

-

Yuen2017 G

ANTXR1

SP0084864

chr2:
69379281-69379281

C

G

intronic

De novo

-

Trost2022 G

ANTXR1

SJD_44.3

chr2:
69392451-69392451

A

T

intronic

De novo

-

Trost2022 G

ANTXR1

AUTPGX_1020

chr2:
69360604-69360604

C

A

intronic

De novo

-

Trost2022 G

ANTXR1

5-5203-003

chr2:
69374255-69374255

A

G

intronic

De novo

-

Trost2022 G

ANTXR1

AU2653301

chr2:
69318442-69318442

G

A

intronic

De novo

-

Trost2022 G

ANTXR1

REACH000640

chr2:
69350866-69350866

T

C

intronic

De novo

-

Trost2022 G

ANTXR1

MSSNG00436-003

chr2:
69253405-69253405

G

A

intronic

De novo

-

Trost2022 G

ANTXR1

MSSNG00424-004

chr2:
69284334-69284334

G

A

intronic

De novo

-

Trost2022 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
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