or
or
Exact

Results for "SDHA"

Variant Events: 46

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
SDHA     PN400514chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     PN400305chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     MSSNG00089-003chr5:
252920-252920		GAintronicDe novo--Trost2022 G
SDHA     7-0399-003chr5:
252647-252647		GAintronicDe novo--Trost2022 G
SDHA     REACH000249chr5:
252647-252647		GAintronicDe novo--Trost2022 G
SDHA     CC1245_201chr5:
233590-233590		ATsplicingDe novosplicing10.07-Fu2022 E
SDHA     9190794chr5:
218468-218468		GAUTR5De novo--Fu2022 E
SDHA     2-1434-003chr5:
263052-263061		TTTTTGTTTTTTTTTintergenicDe novo--Yuen2017 G
SDHA     PN400489chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     PN400182chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     PN400116chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     PN400495chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     PN400551chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     PN400125chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     SSC08246chr5:
251135-251135		GAexonicDe novononsynonymous SNVNM_001294332
NM_004168		c.G1436A
c.G1580A		p.R479H
p.R527H		19.83.295E-5Fu2022 E
Lim2017 E
Trost2022 G
SDHA     PN400292chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     PN400590chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     PN400581chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     PN400341chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     PN400282chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     1-1063-004chr5:
223560-223560		CGintronicDe novo--Trost2022 G
SDHA     PN400532chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     SP0083027chr5:
226053-226053		GAexonicDe novononsynonymous SNVNM_001294332
NM_004168		c.G368A
c.G512A		p.R123H
p.R171H		35.08.24E-6Fu2022 E
Trost2022 G
Zhou2022 GE
SDHA     PN400439chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     SP0033401chr5:
224671-224671		GAintronicDe novo-1.0E-4Fu2022 E
Trost2022 G
SDHA     7-0399-003chr5:
252598-252598		CGintronicDe novo--Trost2022 G
SDHA     13504.p1chr5:
251135-251135		GAexonicDe novononsynonymous SNVNM_001294332
NM_004168		c.G1436A
c.G1580A		p.R479H
p.R527H		19.83.295E-5Iossifov2012 E
Iossifov2014 E
Ji2016 E
Kosmicki2017 E
Satterstrom2020 E
Zhou2022 GE
SDHA     AU2207301chr5:
252598-252598		CGintronicDe novo--Trost2022 G
SDHA     MT_54.3chr5:
244027-244027		TTGintronicDe novo--Trost2022 G
SDHA     PN400103chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     12225.p1chr5:
230941-230941		GGCCGCTGGATCTCACCAGATAintronicDe novo--Satterstrom2020 E
SDHA     2-1369-003chr5:
246525-246525		AGintronicDe novo--Trost2022 G
SDHA     2-0725-003chr5:
229466-229466		ATintronicDe novo--Trost2022 G
SDHA     5926chr5:
230941-230941		GGCCGCTGGATCTCACCAGATAintronicDe novo--Trost2022 G
SDHA     MSSNG00127-004chr5:
224279-224279		TCintronicDe novo--Trost2022 G
SDHA     7-0457-004chr5:
224416-224416		GAintronicDe novo--Trost2022 G
SDHA     AU2207301chr5:
252643-252643		CTintronicDe novo--Trost2022 G
SDHA     5-5101-003chr5:
252647-252647		GAintronicDe novo--Trost2022 G
SDHA     PN400249chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     MSSNG00041-003chr5:
252642-252642		TCintronicDe novo--Trost2022 G
SDHA     REACH000249 Complex Event; expand row to view variants  De novo--Trost2022 G
Trost2022 G
SDHA     PN400470chr5:
256483-256485		CTTCexonicUnknownframeshift deletionNM_001294332
NM_004168		c.1800_1801del
c.1944_1945del		p.T600fs
p.T648fs		-0.0135Leblond2019 E
SDHA     5-5101-003 Complex Event; expand row to view variants  De novo--Trost2022 G
Trost2022 G
SDHA     7-0399-003 Complex Event; expand row to view variants  De novo--Trost2022 G
Trost2022 G
SDHA     MSSNG00041-003chr5:
252598-252598		CGintronicDe novo--Trost2022 G
SDHA     MSSNG00066-004chr5:
252598-252598		CGintronicDe novo--Trost2022 G
Source Variant Information

, -

Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
More

VariCarta Copyright © 2016-2023 Contact Us