Variant Results

or

or

Results for "PLA2G4A"

Variant Events: 25

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

PLA2G4A

1-0403-004

chr1:
186987747-186987747

T

A

intergenic

De novo

-

-

Yuen2017 G

PLA2G4A

2-0144-003

chr1:
186928190-186928190

T

C

intronic

De novo

-

-

Trost2022 G
Yuen2017 G

PLA2G4A

AU4327303

chr1:
186999042-186999048

GAAAAAA

GAAAAAAA

intergenic

De novo

-

-

Yuen2017 G

PLA2G4A

AU066818

chr1:
186890859-186890859

T

C

intronic

De novo

-

-

Trost2022 G
Yuen2017 G

PLA2G4A

2-0256-004

chr1:
186899746-186899746

T

C

intronic

De novo

-

-

Trost2022 G
Yuen2017 G

PLA2G4A

1-0144-004

chr1:
186839995-186839995

G

A

intronic

De novo

-

-

Trost2022 G
Yuen2017 G

PLA2G4A

2-0016-003

chr1:
187006853-187006853

G

T

intergenic

De novo

-

-

Yuen2017 G

PLA2G4A

2-1402-003

chr1:
187035226-187035226

G

T

intergenic

De novo

-

-

Yuen2017 G

PLA2G4A

1-0286-004

chr1:
186918426-186918426

G

A

intronic

De novo

-

-

Yuen2017 G

PLA2G4A

2-0036-003

chr1:
187006853-187006853

G

T

intergenic

De novo

-

-

Yuen2016 G

PLA2G4A

1-0455-004

chr1:
187060096-187060096

C

T

intergenic

De novo

-

-

Yuen2017 G

PLA2G4A

SP0020550

chr1:
186839876-186839876

C

T

intronic

De novo

-

Trost2022 G

PLA2G4A

7-0416-003

chr1:
186797272-186797272

T

G

upstream

De novo

-

-

Trost2022 G

PLA2G4A

1-0469-003

chr1:
186918414-186918414

G

GAAAAGAAAGAAAGAAAGAAAAAA

intronic

De novo

-

-

Yuen2017 G

PLA2G4A

SP0118615

chr1:
186839891-186839891

A

T

intronic

De novo

-

Fu2022 E

PLA2G4A

SP0125757

chr1:
186839882-186839882

A

T

intronic

De novo

-

-

Fu2022 E
Trost2022 G

PLA2G4A

MSSNG00213-003

chr1:
186885680-186885680

G

A

intronic

De novo

-

-

Trost2022 G

PLA2G4A

MSSNG00085-003

chr1:
186845676-186845676

G

A

intronic

De novo

-

-

Trost2022 G

PLA2G4A

REACH000696

chr1:
186949751-186949751

T

C

intronic

De novo

-

-

Trost2022 G

PLA2G4A

AU4153301

Complex Event; expand row to view variants

De novo

-

-

Trost2022 G
Yuen2017 G

PLA2G4A

2-1759-003

chr1:
186891399-186891399

C

G

intronic

De novo

-

-

Trost2022 G

PLA2G4A

2-1264-003

chr1:
186899203-186899217

TGAGAGAGAGAGAGA

TGAGAGAGAGAGA

intronic

De novo

-

-

Yuen2017 G

PLA2G4A

PN400102

chr1:
186925350-186925350

C

T

exonic

De novo

nonsynonymous SNV

NM_001311193
NM_024420

c.C1273T
c.C1453T

p.R425C
p.R485C

19.22

-

Leblond2019 E

PLA2G4A

AU1521301

chr1:
187043184-187043186

TGG

TG

intergenic

De novo

-

-

Yuen2017 G

PLA2G4A

3-0482-000

chr1:
186851471-186851471

C

A

intronic

De novo

-

-

Trost2022 G
Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
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