Variant Results

or

Results for "OPRM1"

Variant Events: 55

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

OPRM1

AU058104

chr6:
154162542-154162542

G

A

intergenic

De novo

-

Yuen2017 G

OPRM1

AU061003

chr6:
153973254-153973254

G

A

intergenic

De novo

-

Yuen2017 G

OPRM1

1-0329-003

chr6:
154395038-154395038

A

C

intronic

De novo

-

Trost2022 G
Yuen2017 G

OPRM1

PN400104

chr6:
154412276-154412276

G

A

exonic

Unknown

nonsynonymous SNV

NM_001285527
NM_001285528
NM_000914
NM_001008503
NM_001008504
NM_001008505
NM_001145280
NM_001145281
NM_001145282
NM_001145283
NM_001145284
NM_001145285
NM_001145286
NM_001145287
NM_001285523
NM_001285526
NM_001285524
NM_001145279

c.G533A
c.G533A
c.G833A
c.G833A
c.G833A
c.G833A
c.G533A
c.G590A
c.G833A
c.G833A
c.G833A
c.G833A
c.G833A
c.G533A
c.G833A
c.G533A
c.G1112A
c.G1112A

p.R178Q
p.R178Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R178Q
p.R197Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R178Q
p.R278Q
p.R178Q
p.R371Q
p.R371Q

33.0

6.625E-5

Leblond2019 E

OPRM1

3-0482-000

chr6:
154114879-154114880

AC

A

intergenic

De novo

-

Yuen2017 G

OPRM1

1-0882-003

chr6:
154080561-154080561

C

T

intergenic

De novo

-

Yuen2017 G

OPRM1

7-0023-003

chr6:
153983229-153983236

TTCTCTCT

TTCT

intergenic

De novo

-

Yuen2017 G

OPRM1

MSSNG00048-003

chr6:
154451453-154451453

G

A

UTR3

De novo

-

Trost2022 G

OPRM1

1-0373-003

chr6:
153750112-153750112

T

G

intergenic

De novo

-

Yuen2017 G

OPRM1

2-1591-003

chr6:
154261210-154261210

G

C

intergenic

De novo

-

Yuen2017 G

OPRM1

2-1066-004

chr6:
154460293-154460294

TC

AA

intronic

De novo

-

Trost2022 G

OPRM1

MSSNG00401-003

chr6:
154421386-154421386

A

T

intronic

De novo

-

Trost2022 G

OPRM1

REACH000209

chr6:
154421438-154421438

A

T

intronic

De novo

-

Trost2022 G

OPRM1

AU3809302

chr6:
153970759-153970759

G

A

intergenic

De novo

-

Yuen2017 G

OPRM1

1-1055-003

chr6:
154361414-154361414

G

A

intronic

De novo

-

Trost2022 G

OPRM1

MSSNG00069-003

chr6:
154407613-154407613

T

C

intronic

De novo

-

Trost2022 G

OPRM1

PN400385

chr6:
154412276-154412276

G

A

exonic

Unknown

nonsynonymous SNV

NM_001285527
NM_001285528
NM_000914
NM_001008503
NM_001008504
NM_001008505
NM_001145280
NM_001145281
NM_001145282
NM_001145283
NM_001145284
NM_001145285
NM_001145286
NM_001145287
NM_001285523
NM_001285526
NM_001285524
NM_001145279

c.G533A
c.G533A
c.G833A
c.G833A
c.G833A
c.G833A
c.G533A
c.G590A
c.G833A
c.G833A
c.G833A
c.G833A
c.G833A
c.G533A
c.G833A
c.G533A
c.G1112A
c.G1112A

p.R178Q
p.R178Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R178Q
p.R197Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R178Q
p.R278Q
p.R178Q
p.R371Q
p.R371Q

33.0

6.625E-5

Leblond2019 E

OPRM1

1-0484-003

chr6:
154239961-154239961

G

A

intergenic

De novo

-

Yuen2017 G

OPRM1

AU4286302

chr6:
153802734-153802734

T

C

intergenic

De novo

-

Yuen2017 G

OPRM1

AU4327303

chr6:
154196511-154196511

G

C

intergenic

De novo

-

Yuen2017 G

OPRM1

2-1594-003

chr6:
154332546-154332546

A

G

intronic

De novo

-

Trost2022 G
Yuen2017 G

OPRM1

3-0432-000

chr6:
154452771-154452771

A

C

UTR3

De novo

-

Trost2022 G
Yuen2016 G
Yuen2017 G

OPRM1

PN400375

chr6:
154412276-154412276

G

A

exonic

Unknown

nonsynonymous SNV

NM_001285527
NM_001285528
NM_000914
NM_001008503
NM_001008504
NM_001008505
NM_001145280
NM_001145281
NM_001145282
NM_001145283
NM_001145284
NM_001145285
NM_001145286
NM_001145287
NM_001285523
NM_001285526
NM_001285524
NM_001145279

c.G533A
c.G533A
c.G833A
c.G833A
c.G833A
c.G833A
c.G533A
c.G590A
c.G833A
c.G833A
c.G833A
c.G833A
c.G833A
c.G533A
c.G833A
c.G533A
c.G1112A
c.G1112A

p.R178Q
p.R178Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R178Q
p.R197Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R178Q
p.R278Q
p.R178Q
p.R371Q
p.R371Q

33.0

6.625E-5

Leblond2019 E

OPRM1

5-0138-003

chr6:
154187206-154187206

T

C

intergenic

De novo

-

Yuen2017 G

OPRM1

AU3903302

chr6:
154145539-154145539

G

C

intergenic

De novo

-

Yuen2017 G

OPRM1

PN400369

chr6:
154411211-154411211

C

T

exonic

Unknown

nonsynonymous SNV

NM_001285527
NM_001285528
NM_000914
NM_001008503
NM_001008504
NM_001008505
NM_001145280
NM_001145281
NM_001145282
NM_001145283
NM_001145284
NM_001145285
NM_001145286
NM_001145287
NM_001285523
NM_001285526
NM_001285524
NM_001145279

c.C241T
c.C241T
c.C541T
c.C541T
c.C541T
c.C541T
c.C241T
c.C298T
c.C541T
c.C541T
c.C541T
c.C541T
c.C541T
c.C241T
c.C541T
c.C241T
c.C820T
c.C820T

p.R81C
p.R81C
p.R181C
p.R181C
p.R181C
p.R181C
p.R81C
p.R100C
p.R181C
p.R181C
p.R181C
p.R181C
p.R181C
p.R81C
p.R181C
p.R81C
p.R274C
p.R274C

17.9

0.0017

Leblond2019 E

OPRM1

AU3881302

chr6:
153760461-153760461

G

A

intergenic

De novo

-

Yuen2017 G

OPRM1

AU4122301

chr6:
153930993-153930996

ATTT

ATTTT

intergenic

De novo

-

Yuen2017 G

OPRM1

2-1127-003

chr6:
154057837-154057837

A

G

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

OPRM1

AU3874303

chr6:
154201049-154201049

G

A

intergenic

De novo

-

Yuen2017 G

OPRM1

2-0297-003

chr6:
153861263-153861263

G

A

intergenic

De novo

-

Yuen2017 G

OPRM1

2-0242-004

chr6:
154196836-154196836

C

T

intergenic

De novo

-

Yuen2017 G

OPRM1

2-1486-003

chr6:
153962774-153962774

A

C

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

OPRM1

1-0261-003

chr6:
154002576-154002580

CTGTT

C

intergenic

De novo

-

Yuen2017 G

OPRM1

AU3801301

chr6:
154147135-154147135

G

A

intergenic

De novo

-

Yuen2017 G

OPRM1

2-1066-003

chr6:
154055497-154055497

G

A

intergenic

De novo

-

Yuen2017 G

OPRM1

AU015903

chr6:
153794532-153794532

C

G

intergenic

De novo

-

Yuen2017 G

OPRM1

2-0307-004

chr6:
153932068-153932068

T

C

intergenic

De novo

-

Yuen2017 G

OPRM1

PN400127

chr6:
154412276-154412276

G

A

exonic

Unknown

nonsynonymous SNV

NM_001285527
NM_001285528
NM_000914
NM_001008503
NM_001008504
NM_001008505
NM_001145280
NM_001145281
NM_001145282
NM_001145283
NM_001145284
NM_001145285
NM_001145286
NM_001145287
NM_001285523
NM_001285526
NM_001285524
NM_001145279

c.G533A
c.G533A
c.G833A
c.G833A
c.G833A
c.G833A
c.G533A
c.G590A
c.G833A
c.G833A
c.G833A
c.G833A
c.G833A
c.G533A
c.G833A
c.G533A
c.G1112A
c.G1112A

p.R178Q
p.R178Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R178Q
p.R197Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R178Q
p.R278Q
p.R178Q
p.R371Q
p.R371Q

33.0

6.625E-5

Leblond2019 E

OPRM1

1-0514-003

chr6:
154086512-154086512

T

G

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

OPRM1

PN400279

chr6:
154411211-154411211

C

T

exonic

Unknown

nonsynonymous SNV

NM_001285527
NM_001285528
NM_000914
NM_001008503
NM_001008504
NM_001008505
NM_001145280
NM_001145281
NM_001145282
NM_001145283
NM_001145284
NM_001145285
NM_001145286
NM_001145287
NM_001285523
NM_001285526
NM_001285524
NM_001145279

c.C241T
c.C241T
c.C541T
c.C541T
c.C541T
c.C541T
c.C241T
c.C298T
c.C541T
c.C541T
c.C541T
c.C541T
c.C541T
c.C241T
c.C541T
c.C241T
c.C820T
c.C820T

p.R81C
p.R81C
p.R181C
p.R181C
p.R181C
p.R181C
p.R81C
p.R100C
p.R181C
p.R181C
p.R181C
p.R181C
p.R181C
p.R81C
p.R181C
p.R81C
p.R274C
p.R274C

17.9

0.0017

Leblond2019 E

OPRM1

3-0446-000

chr6:
153746399-153746399

G

A

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

OPRM1

2-0305-004

chr6:
154176296-154176296

G

C

intergenic

De novo

-

Yuen2017 G

OPRM1

1-0329-004

chr6:
154395038-154395038

A

C

intronic

De novo

-

Trost2022 G
Yuen2017 G

OPRM1

MSSNG00099-003

chr6:
154360858-154360858

C

T

exonic

De novo

nonsynonymous SNV

NM_000914
NM_001008503
NM_001008504
NM_001008505
NM_001145282
NM_001145283
NM_001145284
NM_001145285
NM_001145286
NM_001285522
NM_001285523
NM_001285524
NM_001145279

c.C179T
c.C179T
c.C179T
c.C179T
c.C179T
c.C179T
c.C179T
c.C179T
c.C179T
c.C179T
c.C179T
c.C458T
c.C458T

p.P60L
p.P60L
p.P60L
p.P60L
p.P60L
p.P60L
p.P60L
p.P60L
p.P60L
p.P60L
p.P60L
p.P153L
p.P153L

13.21

-

Trost2022 G
Zhou2022 GE

OPRM1

1-0453-003

chr6:
154429832-154429832

G

C

UTR3

De novo

-

Trost2022 G
Yuen2017 G

OPRM1

AU4485302

chr6:
154467840-154467840

C

T

intronic

De novo

-

Trost2022 G
Yuen2017 G

OPRM1

1-0079-008

chr6:
154065150-154065150

G

A

intergenic

De novo

-

Yuen2017 G

OPRM1

AU038203

chr6:
153775638-153775638

A

G

intergenic

De novo

-

Yuen2017 G

OPRM1

PN400490

chr6:
154412276-154412276

G

A

exonic

Unknown

nonsynonymous SNV

NM_001285527
NM_001285528
NM_000914
NM_001008503
NM_001008504
NM_001008505
NM_001145280
NM_001145281
NM_001145282
NM_001145283
NM_001145284
NM_001145285
NM_001145286
NM_001145287
NM_001285523
NM_001285526
NM_001285524
NM_001145279

c.G533A
c.G533A
c.G833A
c.G833A
c.G833A
c.G833A
c.G533A
c.G590A
c.G833A
c.G833A
c.G833A
c.G833A
c.G833A
c.G533A
c.G833A
c.G533A
c.G1112A
c.G1112A

p.R178Q
p.R178Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R178Q
p.R197Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R278Q
p.R178Q
p.R278Q
p.R178Q
p.R371Q
p.R371Q

33.0

6.625E-5

Leblond2019 E

OPRM1

SP0037380

chr6:
154411052-154411052

G

A

exonic

De novo

nonsynonymous SNV

NM_001285527
NM_001285528
NM_000914
NM_001008503
NM_001008504
NM_001008505
NM_001145280
NM_001145281
NM_001145282
NM_001145283
NM_001145284
NM_001145285
NM_001145286
NM_001145287
NM_001285523
NM_001285526
NM_001285524
NM_001145279

c.G82A
c.G82A
c.G382A
c.G382A
c.G382A
c.G382A
c.G82A
c.G139A
c.G382A
c.G382A
c.G382A
c.G382A
c.G382A
c.G82A
c.G382A
c.G82A
c.G661A
c.G661A

p.V28M
p.V28M
p.V128M
p.V128M
p.V128M
p.V128M
p.V28M
p.V47M
p.V128M
p.V128M
p.V128M
p.V128M
p.V128M
p.V28M
p.V128M
p.V28M
p.V221M
p.V221M

22.0

-

Fu2022 E
Trost2022 G
Zhou2022 GE

OPRM1

2-1184-003

chr6:
154154995-154155011

TTCTCTCTCTCTCTCTC

TTCTCTCTCTCTCTC

intergenic

De novo

-

Yuen2017 G

OPRM1

2-1505-003

chr6:
153745106-153745106

A

T

intergenic

De novo

-

Yuen2017 G

OPRM1

SP0142081

chr6:
154440098-154440098

C

A

UTR3

De novo

-

Fu2022 E
Trost2022 G

OPRM1

2-0144-004

chr6:
154110465-154110465

C

T

intergenic

De novo

-

Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
	More