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Results for "VPS52"

Variant Events: 4

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
VPS52     SP0096484chr6:
33231382-33231382
GCintronicDe novo--Fu2022 E
VPS52     SP0044367chr6:
33236849-33236849
CTexonicDe novononsynonymous SNVNM_001289174
NM_001289175
NM_001289176
NM_022553
c.G289A
c.G115A
c.G115A
c.G490A
p.V97I
p.V39I
p.V39I
p.V164I
16.128.584E-6Fu2022 E
Trost2022 G
Zhou2022 GE
VPS52     MT_95.3chr6:
33235502-33235502
AAGexonicDe novoframeshift insertionNM_001289174
NM_001289175
NM_022553
c.746dupC
c.572dupC
c.947dupC
p.A249fs
p.A191fs
p.A316fs
--Trost2022 G
Zhou2022 GE
VPS52     SMHC01348s000chr6:
33235710-33235710
CTexonicDe novononsynonymous SNVNM_001289174
NM_001289175
NM_001289176
NM_022553
c.G664A
c.G490A
c.G490A
c.G865A
p.V222M
p.V164M
p.V164M
p.V289M
26.3-Yuan2023 E
Source Variant Information

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Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
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