or
or
Exact

Results for "LAMA1"

Variant Events: 68

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
LAMA1     PN400534chr18:
7049171-7049171		CTexonicUnknownnonsynonymous SNVNM_005559c.G674Ap.R225H33.00.0064Leblond2019 E
LAMA1     2-1337-003chr18:
7172947-7172947		CTintergenicDe novo--Yuen2016 G
Yuen2017 G
LAMA1     08C75329chr18:
7010164-7010164		TTTTAintronicDe novo--Satterstrom2020 E
Trost2022 G
LAMA1     12289_p1chr18:
6958523-6958523		CTexonicDe novononsynonymous SNVNM_005559c.G7917Ap.M2639I1.786-Fu2022 E
LAMA1     PN400179chr18:
7032153-7032153		CTexonicUnknownnonsynonymous SNVNM_005559c.G2186Ap.R729H28.30.0026Leblond2019 E
LAMA1     1277001chr18:
6980564-6980564		CTexonicDe novononsynonymous SNVNM_005559c.G5963Ap.R1988K7.465-Fu2022 E
LAMA1     Codina-Sola2015:ASD_35chr18:
6999495-6999495		GAexonicMaternalnonsynonymous SNVNM_005559c.C4612Tp.R1538W14.452.0E-4Codina-Sola2015 E
LAMA1     AU3729301chr18:
7226710-7226710		TCintergenicDe novo--Yuen2017 G
LAMA1     PN400548chr18:
7049171-7049171		CTexonicUnknownnonsynonymous SNVNM_005559c.G674Ap.R225H33.00.0064Leblond2019 E
LAMA1     PN400246chr18:
7049171-7049171		CTexonicUnknownnonsynonymous SNVNM_005559c.G674Ap.R225H33.00.0064Leblond2019 E
LAMA1     PN400264chr18:
7049171-7049171		CTexonicUnknownnonsynonymous SNVNM_005559c.G674Ap.R225H33.00.0064Leblond2019 E
LAMA1     PN400281chr18:
7049171-7049171		CTexonicUnknownnonsynonymous SNVNM_005559c.G674Ap.R225H33.00.0064Leblond2019 E
LAMA1     MSSNG00202-003chr18:
6953053-6953053		CTintronicDe novo--Trost2022 G
LAMA1     12289.p1chr18:
6958523-6958523		CTexonicDe novononsynonymous SNVNM_005559c.G7917Ap.M2639I1.786-Iossifov2014 E
Kosmicki2017 E
Krupp2017 E
Lim2017 E
Satterstrom2020 E
Trost2022 G
Wilfert2021 G
Zhou2022 GE
LAMA1     PN400281chr18:
6965301-6965301		CTexonicUnknownnonsynonymous SNVNM_005559c.G7181Ap.R2394Q35.09.884E-5Leblond2019 E
LAMA1     P6Q4Z_01chr18:
6953093-6953093		AGintronicDe novo--Trost2022 G
LAMA1     AU4024303chr18:
6953053-6953053		CTintronicDe novo--Trost2022 G
LAMA1     1-0699-003chr18:
6982338-6982338		CTintronicDe novo--Trost2022 G
Yuen2017 G
LAMA1     MSSNG00089-003chr18:
6953053-6953053		CTintronicDe novo--Trost2022 G
LAMA1     SP0045278chr18:
6950770-6950770		TGintronicDe novo--Trost2022 G
LAMA1     REACH000145chr18:
7019961-7019961		GAintronicDe novo--Trost2022 G
LAMA1     SSC02402chr18:
7034440-7034440		CAintronicDe novo--Trost2022 G
LAMA1     AU4314302chr18:
6982448-6982448		CTintronicDe novo-5.766E-5Trost2022 G
Yuen2017 G
LAMA1     3-0380-002chr18:
7014909-7014909		GAintronicDe novo--Trost2022 G
LAMA1     SP0025437chr18:
7038938-7038938		CTexonicDe novosynonymous SNVNM_005559c.G1434Ap.E478E--Feliciano2019 E
Fu2022 E
Trost2022 G
Zhou2022 GE
LAMA1     1-0654-003chr18:
7017104-7017104		GAintronicDe novo--Trost2022 G
LAMA1     PN400323chr18:
6965341-6965341		GAexonicUnknownnonsynonymous SNVNM_005559c.C7141Tp.R2381C25.00.0024Leblond2019 E
LAMA1     3-0368-000chr18:
6977585-6977585		GAintronicDe novo--Trost2022 G
LAMA1     AU2764301chr18:
7001562-7001562		TCintronicDe novo--Trost2022 G
LAMA1     1-0253-004chr18:
7145382-7145382		CTintergenicDe novo--Yuen2017 G
LAMA1     P6Q4Z_01chr18:
6953095-6953095		TCintronicDe novo--Trost2022 G
LAMA1     5-1003-003chr18:
7085845-7085846		GCAAintronicDe novo--Trost2022 G
LAMA1     PN400524chr18:
7032153-7032153		CTexonicUnknownnonsynonymous SNVNM_005559c.G2186Ap.R729H28.30.0026Leblond2019 E
LAMA1     1-1049-003chr18:
7094924-7094924		TCintronicDe novo--Trost2022 G
LAMA1     3-0278-000chr18:
7058675-7058675		GAintronicDe novo--Trost2022 G
LAMA1     3-0475-000chr18:
7080849-7080849		AAAAATintronicDe novo--Trost2022 G
LAMA1     08C74292chr18:
7042128-7042128		TGintronicDe novo--Satterstrom2020 E
Trost2022 G
LAMA1     3-0833-000chr18:
7045946-7045946		AGintronicDe novo--Trost2022 G
LAMA1     SP0073860chr18:
7049180-7049180		CTexonicDe novononsynonymous SNVNM_005559c.G665Ap.R222Q27.48.0E-4Trost2022 G
LAMA1     10-0008-003chr18:
7038346-7038347		TCTintronicDe novo--Trost2022 G
LAMA1     mAGRE1058chr18:
7046276-7046276		CAsplicingMaternalsplicing23.09.914E-5Cirnigliaro2023 G
LAMA1     2-1535-003chr18:
7040622-7040622		GTintronicDe novo--Trost2022 G
LAMA1     AU3905301chr18:
7034494-7034494		TAexonicMaternalstopgainNM_005559c.A2035Tp.K679X41.0-Cirnigliaro2023 G
LAMA1     PN400195chr18:
7032153-7032153		CTexonicUnknownnonsynonymous SNVNM_005559c.G2186Ap.R729H28.30.0026Leblond2019 E
LAMA1     SP0042713chr18:
7012054-7012054		CCGGGCTGCAGCCCAGGGGGTexonicDe novoframeshift insertionNM_005559c.3446_3447insACCCCCTGGGCTGCAGCCCp.P1149fs--Fu2022 E
Zhou2022 GE
LAMA1     PN400568chr18:
7032153-7032153		CTexonicUnknownnonsynonymous SNVNM_005559c.G2186Ap.R729H28.30.0026Leblond2019 E
LAMA1     DEASD_0407_001chr18:
7032103-7032103		CTexonicDe novononsynonymous SNVNM_005559c.G2236Ap.G746S13.931.651E-5DeRubeis2014 E
Fu2022 E
Kosmicki2017 E
Satterstrom2020 E
Trost2022 G
Zhou2022 GE
LAMA1     SP0029233chr18:
6986218-6986218		GAexonicDe novononsynonymous SNVNM_005559c.C5297Tp.A1766V12.922.471E-5Fu2022 E
Trost2022 G
Zhou2022 GE
LAMA1     PN400292chr18:
7049171-7049171		CTexonicUnknownnonsynonymous SNVNM_005559c.G674Ap.R225H33.00.0064Leblond2019 E
LAMA1     SP0086576chr18:
7011474-7011474		GAexonicDe novononsynonymous SNVNM_005559c.C3512Tp.T1171M10.862.73E-5Fu2022 E
Trost2022 G
Zhou2022 GE
LAMA1     2-1361-003chr18:
7040539-7040539		CTintronicDe novo--Trost2022 G
Yuen2016 G
Yuen2017 G
LAMA1     2-1366-004chr18:
7146746-7146746		AGintergenicDe novo--Yuen2017 G
LAMA1     SP0045624chr18:
6985444-6985444		ATintronicDe novo--Fu2022 E
LAMA1     2-1510-003chr18:
7225292-7225312		GTATTATTATTATTATTATTAGTATTATTATTATTATTAintergenicDe novo--Yuen2017 G
LAMA1     SP0047040chr18:
6964738-6964738		CTexonicDe novosynonymous SNVNM_005559c.G7260Ap.P2420P-8.238E-6Fu2022 E
Trost2022 G
Zhou2022 GE
LAMA1     PN400544chr18:
7032153-7032153		CTexonicUnknownnonsynonymous SNVNM_005559c.G2186Ap.R729H28.30.0026Leblond2019 E
LAMA1     SP0066073chr18:
7037532-7037532		TGintronicDe novo--Fu2022 E
LAMA1     MSSNG00117-003chr18:
6961751-6961751		CAexonicDe novononsynonymous SNVNM_005559c.G7460Tp.R2487L14.33-Trost2022 G
Zhou2022 GE
LAMA1     2-1709-003chr18:
7177943-7177943		CTintergenicDe novo--Yuen2017 G
LAMA1     11225.p1chr18:
6977778-6977778		TAexonicMosaicnonsynonymous SNVNM_005559c.A6293Tp.N2098I22.6-Dou2017 E
LAMA1     AU4327303chr18:
7085618-7085618		CTintronicDe novo--Trost2022 G
Yuen2017 G
LAMA1     PN400119chr18:
7049171-7049171		CTexonicUnknownnonsynonymous SNVNM_005559c.G674Ap.R225H33.00.0064Leblond2019 E
LAMA1     PN400100chr18:
7049171-7049171		CTexonicUnknownnonsynonymous SNVNM_005559c.G674Ap.R225H33.00.0064Leblond2019 E
LAMA1     PN400533chr18:
7032153-7032153		CTexonicUnknownnonsynonymous SNVNM_005559c.G2186Ap.R729H28.30.0026Leblond2019 E
LAMA1     PN400546chr18:
7049171-7049171		CTexonicUnknownnonsynonymous SNVNM_005559c.G674Ap.R225H33.00.0064Leblond2019 E
LAMA1     PN400396chr18:
7049171-7049171		CTexonicUnknownnonsynonymous SNVNM_005559c.G674Ap.R225H33.00.0064Leblond2019 E
LAMA1     11552.p1chr18:
7034440-7034440		CAintronicDe novo--Satterstrom2020 E
LAMA1     AU3635301chr18:
7069483-7069483		CTintronicDe novo--Trost2022 G
Yuen2017 G
Source Variant Information

, -

Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
More

VariCarta Copyright © 2016-2023 Contact Us