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Results for "TOP1MT"

Variant Events: 6

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
TOP1MT     1-0209-003chr8:
144415724-144415724
TCintronicDe novo--Yuen2017 G
TOP1MT     14607.p1chr8:
144397947-144397947
CTexonicMosaic, De novosynonymous SNVNM_001258447
NM_052963
NM_001258446
c.G1209A
c.G1503A
c.G1209A
p.L403L
p.L501L
p.L403L
2.764-Dou2017 E
Iossifov2014 E
Kosmicki2017 E
Krupp2017 E
Satterstrom2020 E
TOP1MT     14100.p1chr8:
144400250-144400250
TCexonicDe novononsynonymous SNVNM_001258447
NM_052963
NM_001258446
c.A859G
c.A1153G
c.A859G
p.K287E
p.K385E
p.K287E
14.038.252E-6Iossifov2014 E
Ji2016 E
Kosmicki2017 E
Satterstrom2020 E
TOP1MT     2-1506-003chr8:
144439231-144439237
TCCAGCCTCCintronicDe novo--Yuen2017 G
TOP1MT     SSC10777chr8:
144400250-144400250
TCexonicDe novononsynonymous SNVNM_001258447
NM_052963
NM_001258446
c.A859G
c.A1153G
c.A859G
p.K287E
p.K385E
p.K287E
14.038.252E-6Lim2017 E
TOP1MT     DEASD_1056_001chr8:
144400047-144400047
GAintronicDe novo-8.914E-6Satterstrom2020 E
Source Variant Information

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Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
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