Variant Results

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Results for "TMF1"

Variant Events: 9

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported
TMF1	14245.p1	chr3: 69078988-69078988	T	C	exonic		De novo	nonsynonymous SNV	NM_007114	c.A2572G	p.K858E	13.23	-	Iossifov2014 E Ji2016 E Kosmicki2017 E Satterstrom2020 E
TMF1	2-1360-003	chr3: 69069878-69069878	A	G	UTR3		De novo					-	-	Yuen2017 G
TMF1	iHART1797	chr3: 69082783-69082783	G	A	exonic		Maternal	stopgain	NM_007114	c.C2317T	p.R773X	42.0	-	Ruzzo2019 G
TMF1	iHART1798	chr3: 69082783-69082783	G	A	exonic		Maternal	stopgain	NM_007114	c.C2317T	p.R773X	42.0	-	Ruzzo2019 G
TMF1	SP0140875	chr3: 69088864-69088864	A	T	intronic		De novo					-	-	Fu2022 E
TMF1	SP0027209	chr3: 69084238-69084238	C	T	exonic		De novo	nonsynonymous SNV	NM_007114	c.G2180A	p.R727H	26.4	-	Fu2022 E
TMF1	SSC11115	chr3: 69078988-69078988	T	C	exonic		De novo	nonsynonymous SNV	NM_007114	c.A2572G	p.K858E	13.23	-	Fu2022 E Lim2017 E
TMF1	SP0076174	chr3: 69077358-69077358	T	A	intronic		De novo					-	-	Fu2022 E
TMF1	SP0076619	chr3: 69075258-69075258	T	TA	intronic		De novo					-	-	Fu2022 E

Source Variant Information

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Paper Information

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Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
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