Variant Results

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Results for "TM4SF19"

Variant Events: 3

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported
TM4SF19	SSC06202	chr3: 196053904-196053904	C	T	splicing		De novo	splicing				11.38	-	Fu2022 E Lim2017 E Trost2022 G
TM4SF19	12840.p1	chr3: 196053904-196053904	C	T	splicing		De novo	splicing				11.38	-	Iossifov2012 E Iossifov2014 E Ji2016 E Kosmicki2017 E Krupp2017 E Satterstrom2020 E Wilfert2021 G Willsey2013 E Zhou2022 GE
TM4SF19	AU3794302	chr3: 196051310-196051361	ACCTGCGGAGGGAGGAGAAACACTGAGCTAAGACGGGGTCGCAGCTGGGGAG	A	exonic		Paternal	frameshift deletion	NM_001204898 NM_001204897 NM_138461	c.202_202del c.280_280del c.280_280del	p.V68fs p.V94fs p.V94fs	-	1.0E-4	Cirnigliaro2023 G

Source Variant Information

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Paper Information

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Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
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