Variant Results

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Results for "CANX"

Variant Events: 10

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported
CANX	AU2328301	chr5: 179132702-179132702	T	C	exonic		De novo	nonsynonymous SNV	NM_001024649 NM_001746	c.T20C c.T20C	p.L7P p.L7P	18.18	-	Trost2022 G
CANX	5-0111-003	chr5: 179143396-179143396	G	C	intronic		De novo					-	-	Trost2022 G Yuen2017 G
CANX	7-0127-003	chr5: 179154261-179154261	A	G	intronic		De novo					-	-	Trost2022 G Yuen2017 G
CANX	2-0003-003	chr5: 179132790-179132790	C	T	exonic		De novo	synonymous SNV	NM_001024649 NM_001746	c.C108T c.C108T	p.D36D p.D36D	-	-	Trost2022 G Yuen2015 G Yuen2017 G Zhou2022 GE
CANX	12380.p1	chr5: 179155680-179155680	C	T	UTR3		De novo					-	2.232E-5	Krumm2015 E
CANX	5-0017-003	chr5: 179128013-179128013	G	A	intronic		De novo					-	-	Trost2022 G Yuen2017 G
CANX	SP0054119	chr5: 179132916-179132916	C	G	intronic		De novo					-	-	Fu2022 E
CANX	5-0019-003	chr5: 179131444-179131444	C	T	intronic		De novo					-	-	Trost2022 G
CANX	TRE_1464	chr5: 179132768-179132768	T	C	exonic		De novo	nonsynonymous SNV	NM_001024649 NM_001746	c.T86C c.T86C	p.I29T p.I29T	17.28	-	Fu2022 E
CANX	SP0040276	chr5: 179125661-179125662	CG	C	upstream		De novo					-	-	Fu2022 E

Source Variant Information

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Paper Information

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Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
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