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Results for "SLC1A4"

Variant Events: 6

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
SLC1A4     PN400284chr2:
65216865-65216865
GTexonicUnknownstopgainNM_003038c.G88Tp.G30X37.0-Leblond2019 E
SLC1A4     NDAR_INVJT291VPH_wes1chr2:
65245299-65245299
GAexonicDe novononsynonymous SNVNM_001193493
NM_003038
c.G235A
c.G1129A
p.V79M
p.V377M
36.01.647E-5DeRubeis2014 E
Kosmicki2017 E
Lim2017 E
Satterstrom2020 E
SLC1A4     AU4250301chr2:
65231386-65231405
GTTGTTTGTTTGTTTGTTTGGTTGTTTGTTTGTTTGintronicDe novo--Yuen2017 G
SLC1A4     1-0067-005chr2:
65272636-65272636
CAintergenicDe novo--Yuen2017 G
SLC1A4     2-1633-003chr2:
65263543-65263543
TCintergenicDe novo--Yuen2017 G
SLC1A4     5-0129-003chr2:
65267163-65267163
GAintergenicDe novo--Yuen2017 G
Source Variant Information

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Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
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