Variant Results

or

or

Results for "EXTL3"

Variant Events: 11

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

EXTL3

AU3915301

chr8:
28575163-28575163

C

T

exonic

De novo

synonymous SNV

NM_001440

c.C1587T

p.T529T

-

Trost2022 G
Yuen2017 G
Zhou2022 GE

EXTL3

mAGRE5723

chr8:
28571068-28571068

G

A

splicing

Maternal

splicing

-

-

Cirnigliaro2023 G

EXTL3

mAGRE5722

chr8:
28571068-28571068

G

A

splicing

Maternal

splicing

-

-

Cirnigliaro2023 G

EXTL3

AU1860301

chr8:
28559094-28559094

C

T

UTR5

De novo

-

-

Trost2022 G
Yuen2017 G

EXTL3

2-1730-003

chr8:
28604261-28604261

C

T

intronic

De novo

-

-

Trost2022 G
Yuen2017 G

EXTL3

AU066404

chr8:
28621596-28621596

C

T

intergenic

De novo

-

-

Yuen2017 G

EXTL3

1-0126-004

chr8:
28564102-28564102

T

C

intronic

De novo

-

-

Trost2022 G
Yuen2017 G

EXTL3

SP0061093

chr8:
28600554-28600554

A

C

intronic

De novo

-

-

Trost2022 G

EXTL3

A59

chr8:
28575080-28575080

G

A

exonic

De novo

nonsynonymous SNV

NM_001440

c.G1504A

p.D502N

12.62

Jiao2019 E

EXTL3

1-0547-003

chr8:
28576008-28576008

C

A

intronic

De novo

-

-

Yuen2017 G

EXTL3

AU3903302

chr8:
28584400-28584400

T

C

intronic

De novo

-

-

Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
	More