Variant Results

or

or

Results for "AMIGO1"

Variant Events: 8

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported
AMIGO1	200675742_1082034788	chr1: 110050709-110050709	G	A	exonic		De novo	nonsynonymous SNV	NM_020703	c.C826T	p.R276C	8.787	-	Fu2022 E
AMIGO1	2-1430-003	chr1: 110073848-110073848	A	G	intergenic		De novo					-	-	Yuen2016 G Yuen2017 G
AMIGO1	1-1165-003	chr1: 110051091-110051091	C	G	exonic		De novo	synonymous SNV	NM_020703	c.G444C	p.A148A	-	-	Trost2022 G Zhou2022 GE
AMIGO1	Chen2017:123	chr1: 110050709-110050709	G	A	exonic		De novo	nonsynonymous SNV	NM_020703	c.C826T	p.R276C	8.787	-	Chen2017 E
AMIGO1	SP0006321	chr1: 110051168-110051168	G	A	exonic		De novo	nonsynonymous SNV	NM_020703	c.C367T	p.R123C	13.12	-	Fu2022 E Trost2022 G Zhou2022 GE
AMIGO1	1-0496-003	chr1: 110071065-110071065	G	C	intergenic		De novo					-	-	Yuen2016 G Yuen2017 G
AMIGO1	Kim2020:B34	chr1: 110050180-110050180	C	A	exonic		De novo	nonsynonymous SNV	NM_020703	c.G1355T	p.G452V	16.01	-	Kim2020 E
AMIGO1	SP0143639	chr1: 110050187-110050187	C	T	exonic		De novo	nonsynonymous SNV	NM_020703	c.G1348A	p.G450R	10.13	-	Trost2022 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
	More