Variant Results

or

or

Results for "OBSL1"

Variant Events: 6

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported
OBSL1	1717_14mr	chr2: 220420806-220420806	G	T	exonic		De novo	synonymous SNV	NM_001173431 NM_015311	c.C4545A c.C4545A	p.A1515A p.A1515A	1.427	-	Satterstrom2020 E
OBSL1	10C101480	chr2: 220422963-220422963	C	T	exonic		De novo	nonsynonymous SNV	NM_001173431 NM_015311	c.G3445A c.G3445A	p.G1149R p.G1149R	20.9	9.307E-5	DeRubeis2014 E Kosmicki2017 E Neale2012 E Satterstrom2020 E
OBSL1	iHART1553	chr2: 220434913-220434948	CCCCTCCCTAGGTCCCGGGCTCCGCCGTACCTTTCA	C	exonic		Paternal	nonframeshift deletion	NM_001173408 NM_001173431 NM_015311	c.1007_1012del c.1007_1012del c.1007_1012del	p.336_338del p.336_338del p.336_338del	-	-	Ruzzo2019 G
OBSL1	1-0436-003	chr2: 220433944-220433944	A	T	intronic		De novo					-	-	Yuen2016 G Yuen2017 G
OBSL1	2-1176-003	chr2: 220429341-220429341	G	A	intronic		De novo					-	-	Yuen2017 G
OBSL1	EGAN00001101277	chr2: 220435278-220435278	A	C	exonic		De novo	nonsynonymous SNV	NM_001173408 NM_001173431 NM_015311	c.T677G c.T677G c.T677G	p.V226G p.V226G p.V226G	21.4	3.331E-5	Satterstrom2020 E

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
	More