Variant Results

or

Results for "LPAR1"

Variant Events: 35

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

LPAR1

2-1169-003

chr9:
113875094-113875094

G

C

intergenic

De novo

-

Yuen2017 G

LPAR1

7-0103-003

chr9:
113713847-113713847

A

G

intronic

De novo

-

Yuen2017 G

LPAR1

1-0269-003

chr9:
113841374-113841374

G

GGGTTAA

intergenic

De novo

-

Yuen2017 G

LPAR1

5-0018-003

chr9:
113976168-113976168

G

A

intergenic

De novo

-

Yuen2017 G

LPAR1

AU3729303

chr9:
113997992-113997992

C

A

intergenic

De novo

-

Yuen2017 G

LPAR1

2-1355-003

chr9:
113770726-113770726

A

T

intronic

De novo

-

Yuen2017 G

LPAR1

2-1105-003

chr9:
113689389-113689389

A

G

intronic

De novo

-

Yuen2016 G
Yuen2017 G

LPAR1

200675739@1082034784

chr9:
113704268-113704268

C

A

exonic

De novo

nonsynonymous SNV

NM_001401
NM_057159

c.G226T
c.G226T

p.V76F
p.V76F

16.94

3.0E-4

Satterstrom2020 E

LPAR1

SP0146790

chr9:
113734291-113734291

C

T

intronic

De novo

-

Fu2022 E

LPAR1

1-0439-003

chr9:
113869328-113869328

G

A

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LPAR1

1-0925-003

chr9:
113816957-113816957

G

T

intergenic

De novo

-

Yuen2017 G

LPAR1

AU2793303

chr9:
113926785-113926786

CG

C

intergenic

De novo

-

Yuen2017 G

LPAR1

AU061003

chr9:
113704571-113704571

A

T

intronic

De novo

-

Yuen2017 G

LPAR1

AU4410302

chr9:
113778302-113778302

T

C

intronic

De novo

-

Yuen2017 G

LPAR1

2-1170-003

chr9:
113907432-113907432

G

GCT

intergenic

De novo

-

Yuen2017 G

LPAR1

AU053503

chr9:
113835028-113835028

G

A

intergenic

De novo

-

Yuen2017 G

LPAR1

1-0912-003

chr9:
113836009-113836013

AATGT

A

intergenic

De novo

-

Yuen2017 G

LPAR1

7-0247-003

chr9:
113730725-113730737

TCACACACACACA

TCACACACACA

intronic

De novo

-

Yuen2017 G

LPAR1

1-0274-003

chr9:
113682221-113682221

T

C

intronic

De novo

-

Yuen2017 G

LPAR1

AU058105

chr9:
113942710-113942710

T

C

intergenic

De novo

-

Yuen2017 G

LPAR1

5-0099-003

chr9:
113653457-113653457

T

C

intronic

De novo

-

Yuen2017 G

LPAR1

2-1383-003

chr9:
113941932-113941932

T

C

intergenic

De novo

-

Yuen2017 G

LPAR1

1-0269-005

chr9:
113841374-113841374

G

GGGTTAA

intergenic

De novo

-

Yuen2017 G

LPAR1

5-0041-003

chr9:
114001165-114001165

A

C

intergenic

De novo

-

Yuen2017 G

LPAR1

AU4376301

chr9:
113814829-113814829

G

A

intergenic

De novo

-

Yuen2017 G

LPAR1

2-1561-003

chr9:
113667102-113667102

G

A

intronic

De novo

-

Yuen2017 G

LPAR1

AU015903

chr9:
113714153-113714153

A

G

intronic

De novo

-

Yuen2017 G

LPAR1

1-0213-004

chr9:
113730725-113730737

TCACACACACACA

TCACACACACA

intronic

De novo

-

Yuen2017 G

LPAR1

1-0338-003

chr9:
113907432-113907432

G

GCT

intergenic

De novo

-

Yuen2017 G

LPAR1

AU1725306

chr9:
113758559-113758559

G

A

intronic

De novo

-

Yuen2017 G

LPAR1

1-0274-004

chr9:
113682221-113682221

T

C

intronic

De novo

-

Yuen2017 G

LPAR1

2-1594-003

chr9:
113963646-113963646

C

T

intergenic

De novo

-

Yuen2017 G

LPAR1

1-0995-003

chr9:
113691244-113691244

T

C

intronic

De novo

-

Yuen2017 G

LPAR1

1-0160-004

chr9:
113972933-113972933

T

C

intergenic

De novo

-

Yuen2017 G

LPAR1

1-0936-003

chr9:
113818226-113818226

A

G

intergenic

De novo

-

Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
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