Variant Results

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Results for "TRAF3IP1"

Variant Events: 10

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported
TRAF3IP1	1-0567-004	chr2: 239255736-239255736	C	T	intronic		De novo					-	-	Yuen2017 G
TRAF3IP1	1-0408-003	chr2: 239293725-239293725	C	T	intronic		De novo					-	-	Yuen2016 G Yuen2017 G
TRAF3IP1	08C74732	chr2: 239306173-239306173	C	T	exonic		De novo	nonsynonymous SNV	NM_001139490 NM_015650	c.C1565T c.C1763T	p.T522M p.T588M	10.46	4.158E-5	Fu2022 E Satterstrom2020 E
TRAF3IP1	Kenny2014:2	chr2: 239257490-239257490	G	T	splicing		Unknown	splicing				11.34	-	Kenny2014 T
TRAF3IP1	2-1255-003	chr2: 239310529-239310529	C	G	downstream		De novo					-	-	Yuen2017 G
TRAF3IP1	2-1215-003	chr2: 239291717-239291726	GCTTCCGGAA	G	intronic		De novo					-	-	Yuen2017 G
TRAF3IP1	AU3617302	chr2: 239293025-239293025	A	G	intronic		De novo					-	-	Yuen2017 G
TRAF3IP1	7-0254-003	chr2: 239312756-239312756	C	A	intergenic		De novo					-	-	Yuen2017 G
TRAF3IP1	5-0041-003	chr2: 239260198-239260198	C	A	intronic		De novo					-	-	Yuen2017 G
TRAF3IP1	AU057503	chr2: 239322040-239322040	C	T	intergenic		De novo					-	-	Yuen2017 G

Source Variant Information

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Paper Information

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Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
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