Variant Results

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Results for "FOXJ3"

Variant Events: 14

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

FOXJ3

2-1117-003

chr1:
42739993-42739993

T

C

intronic

De novo

-

-

Yuen2016 G
Yuen2017 G

FOXJ3

SP0074320

chr1:
42693599-42693599

A

C

exonic

De novo

nonsynonymous SNV

NM_001198850
NM_001198852
NM_014947
NM_001198851

c.T483G
c.T483G
c.T483G
c.T483G

p.D161E
p.D161E
p.D161E
p.D161E

17.37

-

Fu2022 E

FOXJ3

2-1497-003

chr1:
42836802-42836802

T

C

intergenic

De novo

-

-

Yuen2017 G

FOXJ3

2-1185-003

chr1:
42735125-42735128

CTAT

CT

intronic

De novo

-

-

Yuen2017 G

FOXJ3

AU0638302

chr1:
42729956-42729956

G

C

intronic

De novo

-

-

Yuen2017 G

FOXJ3

13964.p1

chr1:
42679559-42679559

T

C

intronic

De novo

-

-

Turner2016 G
Werling2018 G

FOXJ3

AU1909304

chr1:
42843929-42843929

G

A

intergenic

De novo

-

-

Yuen2017 G

FOXJ3

1-0661-003

chr1:
42661928-42661928

A

C

intronic

De novo

-

-

Yuen2017 G

FOXJ3

09C85024

chr1:
42647625-42647625

G

A

exonic

De novo

synonymous SNV

NM_001198852
NM_001198850
NM_014947
NM_001198851

c.C1614T
c.C1716T
c.C1716T
c.C1716T

p.I538I
p.I572I
p.I572I
p.I572I

-

DeRubeis2014 E
Kosmicki2017 E

FOXJ3

AU3649304

chr1:
42842254-42842254

C

T

intergenic

De novo

-

-

Yuen2017 G

FOXJ3

1-0323-004

chr1:
42776423-42776423

G

A

intronic

De novo

-

-

Yuen2017 G

FOXJ3

3-0391-000

chr1:
42786926-42786926

C

T

intronic

De novo

-

-

Yuen2017 G

FOXJ3

1-0547-003

chr1:
42676235-42676235

T

C

intronic

De novo

-

-

Yuen2017 G

FOXJ3

AU3730301

chr1:
42662130-42662130

G

A

intronic

De novo

-

-

Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
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