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Results for "SNHG5"

Variant Events: 97

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
SNHG5     AU1860301chr6:
86761529-86761529
CTintergenicDe novo--Yuen2017 G
SNHG5     AU4032305chr6:
87295252-87295252
ATintergenicDe novo--Yuen2017 G
SNHG5     1-0383-003chr6:
87354962-87354962
GAintergenicDe novo--Yuen2017 G
SNHG5     7-0273-003chr6:
86553885-86553885
GAintergenicDe novo--Yuen2017 G
SNHG5     7-0095-004chr6:
87503036-87503037
TGTintergenicDe novo--Yuen2017 G
SNHG5     5-0055-003chr6:
86859135-86859138
AATTAintergenicDe novo--Yuen2017 G
SNHG5     1-0708-003chr6:
87380179-87380179
GAintergenicDe novo--Yuen2017 G
SNHG5     AU0780301chr6:
86521552-86521552
CTintergenicDe novo--Yuen2017 G
SNHG5     1-0579-003chr6:
86863046-86863050
TGGGGTGGintergenicDe novo--Yuen2017 G
SNHG5     AU4365302chr6:
87285218-87285218
GAintergenicDe novo--Yuen2017 G
SNHG5     1-0751-003chr6:
87372463-87372463
TCintergenicDe novo--Yuen2017 G
SNHG5     AU3724302chr6:
87443827-87443827
CTintergenicDe novo--Yuen2017 G
SNHG5     AU3053301chr6:
86442516-86442516
TAintergenicDe novo--Yuen2017 G
SNHG5     2-0273-003chr6:
86730427-86730427
AGintergenicDe novo--Yuen2017 G
SNHG5     2-1734-003chr6:
86976769-86976769
ACintergenicDe novo--Yuen2017 G
SNHG5     7-0135-003chr6:
87039190-87039190
GTintergenicDe novo--Yuen2017 G
SNHG5     7-0215-003chr6:
86996032-86996032
CAintergenicDe novo--Yuen2017 G
SNHG5     2-1734-003chr6:
86976773-86976773
ATintergenicDe novo--Yuen2017 G
SNHG5     AU034904chr6:
86641748-86641748
AGintergenicDe novo--Yuen2017 G
SNHG5     1-0567-003chr6:
86820524-86820524
AGintergenicDe novo--Yuen2017 G
SNHG5     AU065304chr6:
87451175-87451175
ACintergenicDe novo--Yuen2017 G
SNHG5     2-0296-003chr6:
86410258-86410258
CTintergenicDe novo--Yuen2017 G
SNHG5     1-0075-003chr6:
87564737-87564737
AGintergenicDe novo--Yuen2017 G
SNHG5     1-0671-003chr6:
87582254-87582254
TGintergenicDe novo--Yuen2017 G
SNHG5     2-1333-003chr6:
86413555-86413555
GAintergenicDe novo--Yuen2017 G
SNHG5     1-0222-003chr6:
86980748-86980748
GTintergenicDe novo--Yuen2017 G
SNHG5     AU4067303chr6:
87114009-87114009
GTintergenicDe novo--Yuen2017 G
SNHG5     AU2140306chr6:
86873849-86873849
CTintergenicDe novo--Yuen2017 G
SNHG5     2-1195-003chr6:
87354503-87354503
CTintergenicDe novo--Yuen2016 G
SNHG5     1-0547-003chr6:
86736238-86736238
CTintergenicDe novo--Yuen2017 G
SNHG5     2-1620-003chr6:
87083220-87083221
TGTintergenicDe novo--Yuen2017 G
SNHG5     1-0253-005chr6:
87244417-87244417
CGintergenicDe novo--Yuen2017 G
SNHG5     AU031203chr6:
87275726-87275726
TGintergenicDe novo--Yuen2017 G
SNHG5     2-1454-003chr6:
87016211-87016211
CTintergenicDe novo--Yuen2017 G
SNHG5     AU3955303chr6:
86942084-86942084
TCintergenicDe novo--Yuen2017 G
SNHG5     2-1617-003chr6:
86687853-86687853
CGintergenicDe novo--Yuen2017 G
SNHG5     AU046904chr6:
87517716-87517716
CTintergenicDe novo--Yuen2017 G
SNHG5     2-1143-003chr6:
87204143-87204143
TCintergenicDe novo--Yuen2017 G
SNHG5     AU3891303chr6:
87407390-87407390
GAintergenicDe novo--Yuen2017 G
SNHG5     1-0292-005chr6:
87163045-87163045
GTintergenicDe novo--Yuen2017 G
SNHG5     AU2129303chr6:
86916494-86916494
GTintergenicDe novo--Yuen2017 G
SNHG5     AU071703chr6:
87404946-87404946
GAintergenicDe novo--Yuen2017 G
SNHG5     2-1693-003chr6:
86907222-86907222
TAintergenicDe novo--Yuen2017 G
SNHG5     5-0055-004chr6:
86859135-86859138
AATTAintergenicDe novo--Yuen2017 G
SNHG5     2-1426-003chr6:
86798427-86798428
CTCintergenicDe novo--Yuen2017 G
SNHG5     5-0128-003chr6:
87307163-87307166
TCCCTCCCCintergenicDe novo--Yuen2017 G
SNHG5     3-0185-000chr6:
86875221-86875221
GCintergenicDe novo--Yuen2017 G
SNHG5     A2chr6:
86555435-86555435
GAintergenicDe novo--Wu2018 G
SNHG5     1-0512-003chr6:
87110954-87110954
AGintergenicDe novo--Yuen2017 G
SNHG5     2-1422-003chr6:
87013545-87013545
AGintergenicDe novo--Yuen2017 G
SNHG5     5-0014-004chr6:
87050752-87050752
CTintergenicDe novo--Yuen2017 G
SNHG5     1-0493-003chr6:
86515080-86515080
GCintergenicDe novo--Yuen2016 G
Yuen2017 G
SNHG5     2-0102-004chr6:
87147803-87147803
ACintergenicDe novo--Yuen2017 G
SNHG5     2-1487-003chr6:
86763143-86763143
GAintergenicDe novo--Yuen2017 G
SNHG5     1-0482-003chr6:
87492088-87492088
TAintergenicDe novo--Yuen2016 G
Yuen2017 G
SNHG5     AU3859301chr6:
86851710-86851710
AGintergenicDe novo--Yuen2017 G
SNHG5     1-0252-003chr6:
87083481-87083481
TCintergenicDe novo--Yuen2017 G
SNHG5     AU3809302chr6:
86501217-86501217
GAintergenicDe novo--Yuen2017 G
SNHG5     1-0673-003chr6:
87109285-87109285
GCintergenicDe novo--Yuen2017 G
SNHG5     1-0898-003chr6:
86861872-86861872
CAintergenicDe novo--Yuen2017 G
SNHG5     2-1174-006chr6:
87032102-87032102
TAintergenicDe novo--Yuen2017 G
SNHG5     AU3728301chr6:
86810463-86810463
TCintergenicDe novo--Yuen2017 G
SNHG5     AU4215302chr6:
86645988-86645988
GTintergenicDe novo--Yuen2017 G
SNHG5     1-0572-003chr6:
87127481-87127484
ACGCACintergenicDe novo--Yuen2017 G
SNHG5     2-1451-003chr6:
87224191-87224191
CAintergenicDe novo--Yuen2017 G
SNHG5     AU4327303chr6:
86869297-86869297
GAintergenicDe novo--Yuen2017 G
SNHG5     2-1719-003chr6:
86778369-86778369
CTintergenicDe novo--Yuen2017 G
SNHG5     1-0969-003chr6:
86816068-86816068
AGintergenicDe novo--Yuen2017 G
SNHG5     11888.p1chr6:
86716321-86716321
GAintergenicDe novo--Werling2018 G
SNHG5     2-1137-003chr6:
86858908-86858908
TAintergenicDe novo--Yuen2016 G
Yuen2017 G
SNHG5     AU4233301chr6:
87358786-87358786
ATintergenicDe novo--Yuen2017 G
SNHG5     AU4233301chr6:
87573283-87573283
CAintergenicDe novo--Yuen2017 G
SNHG5     AU4069301chr6:
87323940-87323940
CTintergenicDe novo--Yuen2017 G
SNHG5     2-0144-003chr6:
86742787-86742787
GCintergenicDe novo--Yuen2017 G
SNHG5     2-1360-003chr6:
87420901-87420901
GAintergenicDe novo--Yuen2016 G
Yuen2017 G
SNHG5     74-0688chr6:
86406219-86406219
CTintergenicInherited--Michaelson2012 G
SNHG5     2-1378-003chr6:
86649582-86649582
TCintergenicDe novo--Yuen2017 G
SNHG5     AU072904chr6:
87637031-87637051
TAAAATAAAAATAAAAATAAATAAAATAAAAATAAAintergenicDe novo--Yuen2017 G
SNHG5     AU3907301chr6:
87242705-87242705
TAintergenicDe novo--Yuen2017 G
SNHG5     1-0757-003chr6:
87122488-87122488
TCintergenicDe novo--Yuen2017 G
SNHG5     1-0570-003chr6:
87567463-87567463
AGintergenicDe novo--Yuen2017 G
SNHG5     3-0391-000chr6:
87048453-87048453
GTintergenicDe novo--Yuen2017 G
SNHG5     3-0391-000chr6:
87049213-87049213
GAintergenicDe novo--Yuen2017 G
SNHG5     AU079605chr6:
87270787-87270787
GTintergenicDe novo--Yuen2017 G
SNHG5     14370.p1chr6:
86923463-86923463
CAintergenicDe novo--Turner2016 G
SNHG5     AU054303chr6:
87438334-87438334
GAintergenicDe novo--Yuen2017 G
SNHG5     2-1357-004chr6:
87477172-87477172
GAintergenicDe novo--Yuen2017 G
SNHG5     AU075803chr6:
87561913-87561913
AGintergenicDe novo--Yuen2017 G
SNHG5     AU1725306chr6:
86788769-86788769
CAintergenicDe novo--Yuen2017 G
SNHG5     2-1357-004chr6:
87482206-87482206
GCintergenicDe novo--Yuen2017 G
SNHG5     AU2072302chr6:
87569916-87569916
TAintergenicDe novo--Yuen2017 G
SNHG5     2-1459-003chr6:
86628104-86628104
TCintergenicDe novo--Yuen2016 G
SNHG5     2-1297-004chr6:
87070374-87070374
CTintergenicDe novo--Yuen2017 G
SNHG5     1-1004-003chr6:
86551848-86551848
GAintergenicDe novo--Yuen2017 G
SNHG5     1-0065-004chr6:
86775666-86775666
GAintergenicDe novo--Yuen2017 G
SNHG5     AU4347301chr6:
86740521-86740521
CGintergenicDe novo--Yuen2017 G
SNHG5     2-1194-003chr6:
87313531-87313531
CTintergenicDe novo--Yuen2017 G
Source Variant Information

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Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
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