Variant Results

or

Results for "HDGFL1"

Variant Events: 90

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

HDGFL1

1-0412-003

chr6:
23225926-23225926

G

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-0102-004

chr6:
23474604-23474604

G

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1398-004

chr6:
23777677-23777677

T

TA

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0464-003

chr6:
23855784-23855784

C

A

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

2-0033-003

chr6:
23185756-23185756

T

C

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

2-1277-003

chr6:
23007725-23007725

A

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0300-004

chr6:
23616684-23616684

A

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

7-0151-003

chr6:
23966316-23966316

T

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1213-003

chr6:
23167000-23167000

A

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1526-003

chr6:
24010475-24010475

A

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0435-003

chr6:
23870231-23870231

G

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1360-003

chr6:
23844695-23844695

C

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0206-003

chr6:
23394340-23394340

G

GGAA

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU2248302

chr6:
23159302-23159302

C

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0052-004

chr6:
23111889-23111889

A

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0627-007

chr6:
23448388-23448388

A

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0336-004

chr6:
24097760-24097760

G

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU1521301

chr6:
23623545-23623555

GAGAGAGGAAG

GAG

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0150-004

chr6:
23225926-23225926

G

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU4239301

chr6:
22951449-22951449

T

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

A14

chr6:
23525404-23525404

A

G

intergenic

De novo

-

Wu2018 G

HDGFL1

2-1322-004

chr6:
23939801-23939801

G

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0289-004

chr6:
24056841-24056841

G

GGGA

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1322-004

chr6:
23322284-23322284

C

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU011021

chr6:
22588463-22588463

T

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU066403

chr6:
23814454-23814454

T

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0495-003

chr6:
23541556-23541556

A

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1160-003

chr6:
22835216-22835216

C

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

2-1308-003

chr6:
22992228-22992228

T

A

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

2-1371-003

chr6:
23783204-23783204

T

C

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

1-0995-003

chr6:
22704996-22705001

ACCCCC

ACCCC

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0745-003

chr6:
23374412-23374412

C

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1189-003

chr6:
23031457-23031457

G

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

2-1366-003

chr6:
23514761-23514761

G

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-0127-004

chr6:
23024797-23024797

G

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0402-003

chr6:
23872348-23872352

GACAC

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0004-003

chr6:
23936462-23936468

TGGAACA

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1736-003

chr6:
23583279-23583279

C

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1300-003

chr6:
23973439-23973439

C

A

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

AU066206

chr6:
24104297-24104297

G

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0862-003

chr6:
23623873-23623873

C

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0558-003

chr6:
22624102-22624102

A

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU4122301

chr6:
23199669-23199669

A

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0372-003

chr6:
23346630-23346630

C

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

2-1355-003

chr6:
23435375-23435376

AT

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0570-003

chr6:
23218406-23218406

G

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU3712301

chr6:
23101759-23101759

T

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU4372309

chr6:
23399986-23399993

TATATGCA

TA

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU1725306

chr6:
23122571-23122571

G

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU3900302

chr6:
23782457-23782457

A

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU4032306

chr6:
23114000-23114000

G

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1254-003

chr6:
23079514-23079514

T

C

intergenic

De novo

-

Yuen2016 G

HDGFL1

AU3586303

chr6:
22741879-22741879

G

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

7-0130-003

chr6:
23357997-23357997

G

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU2951302

chr6:
22958797-22958797

T

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU2951303

chr6:
22958797-22958797

T

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0201-005

chr6:
23384495-23384495

A

ATAAT

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0201-005

chr6:
22847813-22847827

AAAATAGGGGGACAG

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1605-004

chr6:
23693976-23693976

G

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0232-004

chr6:
23318120-23318120

A

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-0126-004

chr6:
23352969-23352969

G

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU2109301

chr6:
22919850-22919850

C

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU3888302

chr6:
23856247-23856247

G

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

5-0018-003

chr6:
23394340-23394340

G

GGAA

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU4343302

chr6:
24008087-24008087

G

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0303-003

chr6:
22757627-22757627

A

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0553-003

chr6:
22730503-22730503

G

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0107-003

chr6:
23013973-23013973

T

A

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

2-1350-003

chr6:
22592791-22592793

CTT

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

3-0431-000

chr6:
23623919-23623919

C

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

2-0296-004

chr6:
23448148-23448148

A

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1085-003

chr6:
23828898-23828898

C

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU031404

Complex Event; expand row to view variants

De novo

-

Yuen2017 G
Yuen2017 G

HDGFL1

AU4056301

chr6:
23382066-23382066

G

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU3721302

chr6:
23417963-23417963

G

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0772-003

chr6:
23003279-23003286

TAATAAAT

TAAT

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1350-003

chr6:
22613469-22613469

G

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU2793302

chr6:
23201374-23201374

A

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1195-003

chr6:
24066595-24066595

G

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

1-0330-004

chr6:
24068676-24068676

T

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1411-003

chr6:
23077495-23077495

C

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

2-1508-003

chr6:
23435890-23435890

C

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

7-0080-003

chr6:
23498363-23498363

T

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1153-003

chr6:
23268111-23268111

G

C

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

1-0007-003

chr6:
22890809-22890809

C

T

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0184-003

chr6:
23210358-23210359

AG

A

intergenic

De novo

-

Yuen2017 G

HDGFL1

1-0402-004

chr6:
23872348-23872352

GACAC

G

intergenic

De novo

-

Yuen2017 G

HDGFL1

2-1346-003

chr6:
23068561-23068561

C

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

HDGFL1

AU3764302

chr6:
23684238-23684238

T

C

intergenic

De novo

-

Yuen2017 G

HDGFL1

AU4347301

chr6:
23847756-23847756

A

G

intergenic

De novo

-

Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
	More