Variant Results

or

Results for "LINC00901"

Variant Events: 107

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

LINC00901

2-0142-004

chr3:
117701578-117701578

G

A

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0597-003

chr3:
116856967-116856967

T

TTC

intergenic

De novo

-

Yuen2017 G

LINC00901

AU4379301

chr3:
117288855-117288855

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

7-0143-003

chr3:
117734061-117734061

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0914-003

chr3:
118342614-118342614

C

T

intergenic

De novo

-

Yuen2017 G

LINC00901

AU2108302

chr3:
118024481-118024481

T

TA

intergenic

De novo

-

Yuen2017 G

LINC00901

2-0043-003

chr3:
116836466-116836466

C

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC00901

AU2139301

chr3:
118298785-118298785

T

G

intergenic

De novo

-

Yuen2017 G

LINC00901

5-0014-003

chr3:
118029145-118029145

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

AU1355301

chr3:
118567733-118567733

C

T

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1358-003

chr3:
117752197-117752197

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

2-0309-004

chr3:
118568099-118568099

A

T

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0075-003

chr3:
117663811-117663811

G

T

intergenic

De novo

-

Yuen2017 G

LINC00901

AU3903302

chr3:
117248699-117248699

C

T

intergenic

De novo

-

Yuen2017 G

LINC00901

5-0147-003

chr3:
117651946-117651946

G

T

intergenic

De novo

-

Yuen2017 G

LINC00901

5-0025-003

chr3:
118150717-118150727

TTTTAAAATAG

T

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0671-003

chr3:
117896801-117896801

T

TCCCCTTTAC

intergenic

De novo

-

Yuen2017 G

LINC00901

3-0438-000

chr3:
117838610-117838610

T

C

intergenic

De novo

-

Yuen2016 G

LINC00901

2-1182-003

chr3:
118541867-118541867

G

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC00901

1-0125-003

chr3:
118249205-118249208

GTCT

G

intergenic

De novo

-

Yuen2017 G

LINC00901

AU2495302

chr3:
117837513-117837513

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

14015.p1

chr3:
117072270-117072270

G

A

intergenic

De novo

-

Turner2016 G

LINC00901

13946.p1

chr3:
117109285-117109285

T

C

intergenic

De novo

-

Turner2016 G

LINC00901

1-0323-003

chr3:
117626668-117626668

C

T

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1279-003

chr3:
117437228-117437228

C

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC00901

12493.p1

chr3:
118078466-118078466

G

C

intergenic

De novo

-

Turner2016 G

LINC00901

1-0534-006

chr3:
118339091-118339091

T

G

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1455-003

chr3:
117801434-117801434

C

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC00901

1-0636-003

chr3:
117475246-117475258

AACACACACACAC

AACACACACAC

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1170-003

chr3:
118224377-118224380

CCTT

C

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1430-003

chr3:
117993198-117993198

C

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC00901

2-1152-003

chr3:
118312452-118312452

G

A

intergenic

De novo

-

Yuen2016 G

LINC00901

2-1212-003

chr3:
118425148-118425148

C

T

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0186-005

chr3:
117736267-117736270

GTAT

G

intergenic

De novo

-

Yuen2017 G

LINC00901

74-0117

chr3:
118263794-118263794

A

T

intergenic

Inherited

-

Michaelson2012 G

LINC00901

AU2292301

chr3:
118317633-118317633

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

AU3866301

chr3:
116650936-116650949

GTTATTATTATTAT

GTTATTATTAT

ncRNA_exonic

De novo

-

Yuen2017 G

LINC00901

AU3371302

chr3:
117117342-117117342

G

T

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1617-003

chr3:
116726898-116726899

TA

T

intergenic

De novo

-

Yuen2017 G

LINC00901

3-0456-000B

chr3:
116853991-116853991

A

G

intergenic

De novo

-

Yuen2017 G

LINC00901

AU1725302

chr3:
116994832-116994832

C

A

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1245-003

chr3:
117278672-117278672

G

A

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1235-004

chr3:
117441285-117441285

G

A

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1362-003

chr3:
118198117-118198117

G

A

intergenic

De novo

-

Yuen2017 G

LINC00901

AU3768302

chr3:
117960846-117960846

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1380-003

chr3:
117844537-117844537

T

C

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC00901

A1

chr3:
118334460-118334460

G

GG

intergenic

De novo

-

Wu2018 G

LINC00901

AU072005

chr3:
118180025-118180025

C

G

intergenic

De novo

-

Yuen2017 G

LINC00901

2-0242-003

chr3:
117515849-117515849

C

T

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0401-003

chr3:
117759779-117759779

C

G

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1258-003

chr3:
117499308-117499309

AT

A

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1341-003

chr3:
116993900-116993900

G

T

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1526-004

chr3:
116988567-116988567

A

G

intergenic

De novo

-

Yuen2017 G

LINC00901

AU4159301

chr3:
116853609-116853609

C

A

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1223-003

chr3:
116816704-116816704

C

A

intergenic

De novo

-

Yuen2017 G

LINC00901

7-0242-003

chr3:
118268333-118268333

C

T

intergenic

De novo

-

Yuen2017 G

LINC00901

2-0006-003

chr3:
116690783-116690783

A

G

intergenic

De novo

-

Yuen2017 G

LINC00901

AU006804

chr3:
116989731-116989731

T

A

intergenic

De novo

-

Yuen2017 G

LINC00901

AU054103

chr3:
118377756-118377756

C

T

intergenic

De novo

-

Yuen2017 G

LINC00901

2-0202-003

chr3:
116780200-116780200

A

G

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0329-003

chr3:
117559201-117559201

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

AU076509

chr3:
117680398-117680398

A

C

intergenic

De novo

-

Yuen2017 G

LINC00901

2-0102-004

chr3:
118604338-118604338

C

T

intergenic

De novo

-

Yuen2017 G

LINC00901

AU2292302

chr3:
117057022-117057022

A

T

intergenic

De novo

-

Yuen2017 G

LINC00901

AU3794302

chr3:
117700939-117700946

GTATATAT

GTATAT

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0572-003

chr3:
116889779-116889779

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

AU2292302

chr3:
118317633-118317633

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

AU3057301

chr3:
118545391-118545393

GAA

GAAAA

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1155-003

chr3:
117596444-117596444

G

T

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC00901

2-1709-003

chr3:
116843676-116843676

C

T

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0079-003

chr3:
118196829-118196829

C

A

intergenic

De novo

-

Yuen2017 G

LINC00901

AU3730301

chr3:
118149389-118149389

A

G

intergenic

De novo

-

Yuen2017 G

LINC00901

7-0179-003

chr3:
118538786-118538799

GTATATATATATAT

GTATATATATAT

intergenic

De novo

-

Yuen2017 G

LINC00901

3-0396-000

chr3:
117580263-117580263

C

T

intergenic

De novo

-

Yuen2016 G

LINC00901

1-0638-003

chr3:
118459071-118459086

TACACACACACACACA

TACACACACACACA

intergenic

De novo

-

Yuen2017 G

LINC00901

2-0132-004

chr3:
116779450-116779450

C

A

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0339-003

chr3:
116972087-116972087

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1709-003

chr3:
118123494-118123494

G

A

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0273-004

chr3:
118484549-118484549

A

G

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0706-003

chr3:
116821030-116821030

A

T

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1137-003

chr3:
116935756-116935756

T

C

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC00901

2-1460-003

chr3:
116900257-116900257

C

T

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1094-005

chr3:
117897453-117897453

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1731-003

chr3:
117049013-117049013

A

T

intergenic

De novo

-

Yuen2017 G

LINC00901

AU4168306

chr3:
116817645-116817645

A

G

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0490-003

chr3:
117269898-117269898

G

A

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1382-003

chr3:
117217977-117217977

C

G

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC00901

2-1689-003

chr3:
118458232-118458232

T

G

intergenic

De novo

-

Yuen2017 G

LINC00901

AU2293301

chr3:
116707012-116707012

A

T

intergenic

De novo

-

Yuen2017 G

LINC00901

2-0310-003

chr3:
117187963-117187970

CATCCAGA

C

intergenic

De novo

-

Yuen2017 G

LINC00901

3-0391-000

chr3:
116962409-116962409

A

G

intergenic

De novo

-

Yuen2017 G

LINC00901

AU4013303

chr3:
118259082-118259082

C

T

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1254-003

chr3:
117130542-117130542

T

A

intergenic

De novo

-

Yuen2016 G

LINC00901

7-0253-005

chr3:
118095011-118095011

G

A

intergenic

De novo

-

Yuen2017 G

LINC00901

A29

chr3:
116961566-116961566

C

T

intergenic

De novo

-

Wu2018 G

LINC00901

1-0126-004

chr3:
118165702-118165702

G

C

intergenic

De novo

-

Yuen2017 G

LINC00901

7-0103-003

chr3:
117504249-117504249

C

G

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1497-003

chr3:
116646169-116646169

G

C

ncRNA_intronic

De novo

-

Yuen2017 G

LINC00901

1-0079-008

chr3:
118609623-118609623

A

G

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0079-008

chr3:
118015522-118015522

C

T

intergenic

De novo

-

Yuen2017 G

LINC00901

2-1267-003

chr3:
118012525-118012525

A

T

intergenic

De novo

-

Yuen2017 G

LINC00901

AU0786305

chr3:
118439465-118439465

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

2-0144-004

chr3:
118595043-118595043

T

C

intergenic

De novo

-

Yuen2017 G

LINC00901

AU3997302

chr3:
116769670-116769670

G

A

intergenic

De novo

-

Yuen2017 G

LINC00901

1-0041-003

chr3:
117276312-117276312

T

A

intergenic

De novo

-

Yuen2016 G
Yuen2017 G

LINC00901

1-0541-003

chr3:
116921704-116921708

CCAAA

C

intergenic

De novo

-

Yuen2017 G

LINC00901

AU4496301

chr3:
118169838-118169838

G

A

intergenic

De novo

-

Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
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