Variant Results

or

or

Results for "PSD2"

Variant Events: 12

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

PSD2

2-1547-003

chr5:
139192306-139192306

C

T

intronic

De novo

-

-

Trost2022 G

PSD2

AU057503

chr5:
139202856-139202856

A

G

intronic

De novo

-

-

Trost2022 G

PSD2

L7T2M_01

chr5:
139181854-139181854

G

A

intronic

De novo

-

-

Trost2022 G

PSD2

1-1102-003

chr5:
139183515-139183515

T

A

intronic

De novo

-

-

Trost2022 G

PSD2

13093.p1

chr5:
139219740-139219740

C

G

exonic

Mosaic

nonsynonymous SNV

NM_032289

c.C2097G

p.H699Q

15.16

-

Dou2017 E
Krupp2017 E

PSD2

1-1122-003

chr5:
139175783-139175783

C

T

intronic

De novo

-

-

Trost2022 G

PSD2

MT_16.3

chr5:
139180089-139180089

C

T

intronic

De novo

-

-

Trost2022 G

PSD2

13608.p1

chr5:
139194843-139194843

C

A

intronic

Mosaic

-

-

Dou2017 E

PSD2

AC02-1234-01

chr5:
139202285-139202285

T

C

intronic

De novo

-

-

Kosmicki2017 E
Satterstrom2020 E
Trost2022 G

PSD2

4-0008-003

chr5:
139204527-139204527

G

A

intronic

De novo

-

-

Trost2022 G

PSD2

111310

chr5:
139218278-139218278

C

T

exonic

nonsynonymous SNV

NM_032289

c.C1889T

p.P630L

23.5

-

Woodbury-Smith2022 E

PSD2

2-0318-003

chr5:
139176470-139176470

G

A

intronic

De novo

-

-

Trost2022 G
Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
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