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Results for "CDH13"

Variant Events: 173

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
CDH13     1-0246-005chr16:
83679384-83679384
GCintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     AU4067301chr16:
82865312-82865312
GTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     3-0432-000chr16:
83119946-83119946
GCintronicDe novo--Trost2022 G
Yuen2016 G
Yuen2017 G
CDH13     133344chr16:
83711952-83711952
CTexonicnonsynonymous SNVNM_001220489
NM_001220490
NM_001257
NM_001220488
c.C1307T
c.C662T
c.C1424T
c.C1565T
p.P436L
p.P221L
p.P475L
p.P522L
24.2-Woodbury-Smith2022 E
CDH13     SP0016664chr16:
83813548-83813548
CGintronicDe novo-9.928E-6Fu2022 E
CDH13     5-0123-003chr16:
82880942-82880942
GAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     5-0123-003chr16:
83571579-83571579
GAintronicDe novo--Yuen2017 G
CDH13     1-0459-004chr16:
83519431-83519431
CTintronicDe novo--Yuen2017 G
CDH13     2-0043-003chr16:
82979051-82979051
CTintronicDe novo--Yuen2016 G
CDH13     1-0606-003chr16:
82660806-82660806
GCintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     2-1279-003chr16:
82967006-82967006
AGintronicDe novo--Trost2022 G
Yuen2016 G
Yuen2017 G
CDH13     2-1352-003chr16:
83302068-83302068
ATintronicDe novo--Yuen2016 G
Yuen2017 G
CDH13     2-1605-004chr16:
83703807-83703807
AAGAGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     7-0080-003chr16:
82710438-82710438
CTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0253-004chr16:
82873449-82873449
CTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0991-003chr16:
83414637-83414637
CGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     11642_p1chr16:
83704459-83704459
AGexonicDe novononsynonymous SNVNM_001220489
NM_001220490
NM_001257
NM_001220488
c.A1049G
c.A404G
c.A1166G
c.A1307G
p.D350G
p.D135G
p.D389G
p.D436G
25.3-Fu2022 E
CDH13     1-0991-003chr16:
83402956-83402956
CGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0991-003chr16:
83401218-83401218
CTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     ASC_CA_69_A2chr16:
82738887-82738887
GAintronicDe novo--Fu2022 E
CDH13     MSSNG00331-003chr16:
83781857-83781857
TGsplicingDe novosplicing22.5-Trost2022 G
Zhou2022 GE
CDH13     1-0991-003chr16:
83393486-83393486
CTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     11492_p1chr16:
83378475-83378475
GAexonicDe novosynonymous SNVNM_001220489
NM_001257
NM_001220488
c.G528A
c.G645A
c.G786A
p.V176V
p.V215V
p.V262V
-2.0E-4Fu2022 E
CDH13     14642.p1chr16:
82779713-82779713
ACintronicDe novo--Turner2016 G
CDH13     1-0191-003chr16:
83552718-83552718
GGCTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0383-003chr16:
83711462-83711462
CTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     PN400195chr16:
83704480-83704480
GAexonicUnknownstopgainNM_001220489
NM_001220490
NM_001257
NM_001220488
c.G1070A
c.G425A
c.G1187A
c.G1328A
p.W357X
p.W142X
p.W396X
p.W443X
33.0-Leblond2019 E
CDH13     2-0240-004chr16:
83398831-83398831
CTintronicDe novo--Yuen2017 G
CDH13     AU3765303 Complex Event; expand row to view variants  De novo--Trost2022 G
Yuen2017 G
CDH13     AU3263301chr16:
83770650-83770650
GAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     AU4079301chr16:
83215151-83215151
AGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     AU4452302chr16:
83402249-83402249
AGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     2-1380-003chr16:
83553397-83553397
TGintronicDe novo--Trost2022 G
Yuen2016 G
Yuen2017 G
CDH13     7-0253-003chr16:
82899956-82899966
GTCTGTTTTCTGTCTGTTTTCTGTTTTCTintronicDe novo--Yuen2017 G
CDH13     AU026604chr16:
82716207-82716207
CGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0671-003chr16:
82879776-82879776
AGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0413-003chr16:
82680984-82680984
TCintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0834-003chr16:
82666102-82666102
TCintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0495-003chr16:
82700627-82700627
CGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     2-1626-003chr16:
82931097-82931097
GTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     2-0102-003chr16:
83461744-83461744
GTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0495-003chr16:
82703813-82703813
AGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0495-003chr16:
82701675-82701675
CGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     11492.p1chr16:
83378475-83378475
GAexonicDe novosynonymous SNVNM_001220489
NM_001257
NM_001220488
c.G528A
c.G645A
c.G786A
p.V176V
p.V215V
p.V262V
-2.0E-4Iossifov2014 E
Kosmicki2017 E
Krupp2017 E
Satterstrom2020 E
Trost2022 G
Wilfert2021 G
Zhou2022 GE
CDH13     1-0433-004chr16:
83131000-83131000
TCintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     2-0102-003chr16:
83481945-83481945
GCintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     11642.p1chr16:
83704459-83704459
AGexonicDe novononsynonymous SNVNM_001220489
NM_001220490
NM_001257
NM_001220488
c.A1049G
c.A404G
c.A1166G
c.A1307G
p.D350G
p.D135G
p.D389G
p.D436G
25.3-Iossifov2014 E
Ji2016 E
Kosmicki2017 E
Lim2017 E
Satterstrom2020 E
Trost2022 G
Wilfert2021 G
Zhou2022 GE
CDH13     2-0102-003chr16:
83471732-83471732
GAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     2-1261-004chr16:
83125722-83125722
TGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     2-1212-003chr16:
83539041-83539041
ACintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     7-0364-003chr16:
82680495-82680495
GAintronicDe novo--Trost2022 G
CDH13     1-1039-003chr16:
82687179-82687179
CAintronicDe novo--Trost2022 G
CDH13     5-0101-003chr16:
82671224-82671224
ATintronicDe novo--Trost2022 G
CDH13     AU2139303chr16:
82785126-82785126
CAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0955-003chr16:
82675716-82675720
AAGTGAintronicDe novo--Trost2022 G
CDH13     4-0073-003chr16:
82667908-82667908
GAintronicDe novo--Trost2022 G
CDH13     iHART2310chr16:
83159081-83159081
AAGexonicPaternalframeshift insertionNM_001220491
NM_001220492
NM_001257
NM_001220488
c.459dupG
c.459dupG
c.459dupG
c.600dupG
p.Q153fs
p.Q153fs
p.Q153fs
p.Q200fs
--Ruzzo2019 G
CDH13     AU4067303chr16:
82719946-82719946
CGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-1124-003chr16:
82784343-82784343
GCintronicDe novo--Trost2022 G
CDH13     1-0534-004chr16:
82791220-82791224
AGCTTTTATGintronicDe novo--Trost2022 G
CDH13     2-1368-003chr16:
83658777-83658791
ATGTGTGTGTGTGTGATGTGTGTGTGTGintronicDe novo--Yuen2017 G
CDH13     MSSNG00415-003chr16:
82739187-82739187
GAintronicDe novo--Trost2022 G
CDH13     REACH000145chr16:
82774839-82774839
TCintronicDe novo--Trost2022 G
CDH13     AU4426303chr16:
83173363-83173363
CTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-1016-003Achr16:
82694990-82694990
AGintronicDe novo--Trost2022 G
CDH13     mAGRE2310chr16:
83159081-83159081
AAGexonicPaternalframeshift insertionNM_001220491
NM_001220492
NM_001257
NM_001220488
c.459dupG
c.459dupG
c.459dupG
c.600dupG
p.Q153fs
p.Q153fs
p.Q153fs
p.Q200fs
--Cirnigliaro2023 G
CDH13     1-1186-003chr16:
82738020-82738020
CTintronicDe novo--Trost2022 G
CDH13     AU076705chr16:
83192535-83192535
GAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0565-004chr16:
83683509-83683509
GTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     AU3846302chr16:
83157324-83157324
CTintronicDe novo--Yuen2017 G
CDH13     3-0430-000chr16:
83033618-83033618
GAintronicDe novo--Trost2022 G
CDH13     AUTPGX_1020chr16:
82943183-82943183
CTintronicDe novo--Trost2022 G
CDH13     2-1694-003chr16:
82882949-82882949
CGintronicDe novo--Trost2022 G
CDH13     MSSNG00415-003chr16:
82893215-82893215
CTintronicDe novo--Trost2022 G
CDH13     2-1341-003chr16:
82918481-82918481
AGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     AU3263302chr16:
83481874-83481874
GAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     2-1694-003chr16:
83132950-83132950
TCintronicDe novo--Trost2022 G
CDH13     7-0178-003chr16:
83132950-83132950
TCintronicDe novo--Trost2022 G
CDH13     1-1063-003chr16:
83130697-83130697
CTintronicDe novo--Trost2022 G
CDH13     7-0178-003chr16:
83132946-83132946
ATTTTTTTTTTTTTTTTTTTTTTGintronicDe novo--Trost2022 G
CDH13     10-1155-003chr16:
83065044-83065044
AGintronicDe novo--Trost2022 G
CDH13     AU011604chr16:
83091369-83091369
CTintronicDe novo--Trost2022 G
CDH13     3-0626-000Achr16:
83053013-83053013
GAintronicDe novo--Trost2022 G
CDH13     7-0453-003chr16:
83060441-83060441
TGintronicDe novo--Trost2022 G
CDH13     1-0148-005chr16:
82774141-82774141
CTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     2-0198-004chr16:
83133171-83133171
TCintronicDe novo--Trost2022 G
CDH13     MSSNG00421-003chr16:
83165188-83165188
GAintronicDe novo--Trost2022 G
CDH13     2-0198-004chr16:
83133157-83133157
AGintronicDe novo--Trost2022 G
CDH13     2-0198-004chr16:
83133163-83133165
ATGAintronicDe novo--Trost2022 G
CDH13     2-0006-003chr16:
83194220-83194220
AGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     7-0178-003chr16:
83132968-83132968
AGintronicDe novo--Trost2022 G
CDH13     2-0198-004chr16:
83133151-83133152
AGTCintronicDe novo--Trost2022 G
CDH13     5-0087-003chr16:
82696551-82696551
CAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     7-0178-003chr16:
83132956-83132956
TCintronicDe novo--Trost2022 G
CDH13     7-0178-003chr16:
83132962-83132963
CTCintronicDe novo--Trost2022 G
CDH13     MSSNG00423-003chr16:
83274983-83274985
TTGTintronicDe novo--Trost2022 G
CDH13     5-0128-003chr16:
83789620-83789620
CTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     MSSNG00423-003chr16:
83274989-83274989
TCintronicDe novo--Trost2022 G
CDH13     MSSNG00359-003chr16:
83267770-83267770
AGintronicDe novo--Trost2022 G
CDH13     MSSNG00423-003chr16:
83272542-83272542
GCintronicDe novo--Trost2022 G
CDH13     AU011604chr16:
83074724-83074724
CTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     AU2355301chr16:
83240201-83240201
CTintronicDe novo--Trost2022 G
CDH13     MSSNG00087-003chr16:
83243969-83243969
CTintronicDe novo--Trost2022 G
CDH13     MSSNG00361-003chr16:
83183357-83183357
GAintronicDe novo--Trost2022 G
CDH13     MSSNG00049-003chr16:
83199955-83199955
CTintronicDe novo--Trost2022 G
CDH13     2-1438-003chr16:
83356898-83356898
ATintronicDe novo--Trost2022 G
CDH13     7-0059-003chr16:
83357936-83357936
GAintronicDe novo--Trost2022 G
CDH13     7-0396-003chr16:
83338878-83338878
TCintronicDe novo--Trost2022 G
CDH13     1-1063-004chr16:
83340666-83340666
TCintronicDe novo--Trost2022 G
CDH13     2-0159-003chr16:
83325109-83325109
CTintronicDe novo--Trost2022 G
CDH13     MSSNG00062-003chr16:
83325791-83325791
AGintronicDe novo--Trost2022 G
CDH13     1-0628-003chr16:
83306857-83306857
GCintronicDe novo--Trost2022 G
CDH13     1-0469-005chr16:
82901656-82901656
CTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     MSSNG00062-003chr16:
83322314-83322314
CGintronicDe novo--Trost2022 G
CDH13     3-0475-000chr16:
83433979-83433979
CTintronicDe novo--Trost2022 G
CDH13     AU2142301chr16:
83450175-83450175
GAintronicDe novo--Trost2022 G
CDH13     MT_184.3chr16:
83410323-83410323
TCintronicDe novo--Trost2022 G
CDH13     MT_184.3chr16:
83410327-83410327
GTintronicDe novo--Trost2022 G
CDH13     2-0704-003chr16:
83658986-83658986
TGintronicDe novo--Trost2022 G
Yuen2016 G
Yuen2017 G
CDH13     3-0345-001chr16:
83392768-83392768
ACintronicDe novo--Trost2022 G
CDH13     1031chr16:
83394233-83394233
GTintronicDe novo--Trost2022 G
CDH13     3-0612-000chr16:
83378697-83378697
CTintronicDe novo--Trost2022 G
CDH13     7-0405-003chr16:
83391689-83391689
CAintronicDe novo--Trost2022 G
CDH13     3-0129-000chr16:
83488932-83488932
CAintronicDe novo--Trost2022 G
CDH13     1-0126-003chr16:
83762374-83762374
GAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0214-003chr16:
83521041-83521041
GAintronicDe novo--Trost2022 G
CDH13     1-0286-004chr16:
83478511-83478512
AACCintronicDe novo--Trost2022 G
CDH13     2-1336-003chr16:
83478511-83478512
AACCintronicDe novo--Trost2022 G
CDH13     2-1451-003chr16:
82871317-82871317
GAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     AU0540302chr16:
83468360-83468360
CTintronicDe novo--Trost2022 G
CDH13     AU079204chr16:
83751786-83751786
CTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0484-003chr16:
83477757-83477759
CAAGAGintronicDe novo--Trost2022 G
CDH13     3-0706-000Achr16:
83466112-83466112
GTintronicDe novo--Trost2022 G
CDH13     MSSNG00020-004chr16:
83467416-83467416
GAintronicDe novo--Trost2022 G
CDH13     7-0449-003chr16:
83682914-83682914
TGintronicDe novo--Trost2022 G
CDH13     MSSNG00438-003chr16:
83697676-83697676
CTintronicDe novo--Trost2022 G
CDH13     5-5005-003chr16:
83638322-83638327
AAACTCAintronicDe novo--Trost2022 G
CDH13     AU4315302chr16:
83668913-83668913
CTintronicDe novo--Trost2022 G
CDH13     1-0731-004chr16:
83536324-83536324
AGintronicDe novo--Trost2022 G
CDH13     1-1159-004chr16:
83568350-83568350
CTintronicDe novo--Trost2022 G
CDH13     2-1290-003chr16:
83441509-83441509
GAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     3-0775-000chr16:
83523049-83523049
GAintronicDe novo--Trost2022 G
CDH13     MSSNG00120-003chr16:
83523514-83523514
TCintronicDe novo--Trost2022 G
CDH13     REACH000229chr16:
83777398-83777398
GTintronicDe novo--Trost2022 G
CDH13     MSSNG00105-004chr16:
83784079-83784079
GAintronicDe novo--Trost2022 G
CDH13     AU2463301chr16:
83750090-83750090
GAintronicDe novo--Trost2022 G
CDH13     MSSNG00003-003chr16:
83765656-83765656
AGintronicDe novo--Trost2022 G
CDH13     AU2320301chr16:
83733468-83733468
AGintronicDe novo--Trost2022 G
CDH13     1-0289-004chr16:
83119838-83119838
AGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     MSSNG00352-003chr16:
83739175-83739175
CTintronicDe novo--Trost2022 G
CDH13     1-0572-003chr16:
83656376-83656376
AGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     SP0232954chr16:
83712011-83712011
GAexonicDe novononsynonymous SNVNM_001220489
NM_001220490
NM_001257
NM_001220488
c.G1366A
c.G721A
c.G1483A
c.G1624A
p.V456M
p.V241M
p.V495M
p.V542M
1.7882.0E-4Trost2022 G
CDH13     2-1806-003chr16:
83731541-83731541
CGintronicDe novo--Trost2022 G
CDH13     AU066403chr16:
83320692-83320692
TCintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     REACH000467chr16:
83821276-83821276
GAintronicDe novo--Trost2022 G
CDH13     7-0227-003chr16:
83822820-83822820
CTintronicDe novo--Trost2022 G
CDH13     5-0512-003chr16:
83796913-83796913
TCintronicDe novo--Trost2022 G
CDH13     MSSNG00077-004chr16:
83817901-83817901
GAintronicDe novo--Trost2022 G
CDH13     2-1764-004chr16:
83790824-83790824
GCintronicDe novo--Trost2022 G
CDH13     7-0011-003chr16:
83792338-83792338
GAintronicDe novo--Trost2022 G
CDH13     AU031204chr16:
83025996-83025996
AGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     PN400128chr16:
83704480-83704480
GAexonicUnknownstopgainNM_001220489
NM_001220490
NM_001257
NM_001220488
c.G1070A
c.G425A
c.G1187A
c.G1328A
p.W357X
p.W142X
p.W396X
p.W443X
33.0-Leblond2019 E
CDH13     2-0132-004chr16:
82709275-82709275
GCintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0638-003chr16:
83351533-83351533
CGintronicDe novo--Yuen2017 G
CDH13     2-1460-003chr16:
82873201-82873201
CAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     2-1338-003chr16:
82758449-82758449
CTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     AU3712301chr16:
82953536-82953536
CAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0912-003chr16:
82750267-82750267
GAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     7-0058-003chr16:
83782087-83782087
ATintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     AU2100302chr16:
83137102-83137102
CTintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     1-0558-003chr16:
83333318-83333318
AGintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     2-1451-004chr16:
82871317-82871317
GAintronicDe novo--Trost2022 G
Yuen2017 G
CDH13     PN400301chr16:
83704480-83704480
GAexonicUnknownstopgainNM_001220489
NM_001220490
NM_001257
NM_001220488
c.G1070A
c.G425A
c.G1187A
c.G1328A
p.W357X
p.W142X
p.W396X
p.W443X
33.0-Leblond2019 E
Source Variant Information

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Paper Information
Title
Authors
Technology
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Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
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