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Results for "SCUBE2"

Variant Events: 8

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
SCUBE2     SJD_49chr11:
9043479-9043479
CGexonicPaternalnonsynonymous SNVNM_001170690
NM_020974
c.G2215C
c.G2707C
p.D739H
p.D903H
29.01.649E-5Toma2013 E
SCUBE2     3-0402-000chr11:
9111335-9111335
CTexonicDe novononsynonymous SNVNM_001170690
NM_020974
c.G175A
c.G175A
p.D59N
p.D59N
12.934.119E-5Tammimies2015 E
SCUBE2     5-0083-003chr11:
9055946-9055946
TCintronicDe novo--Yuen2017 G
SCUBE2     13506.p1chr11:
9111272-9111272
CAexonicDe novostopgainNM_001170690
NM_020974
c.G238T
c.G238T
p.E80X
p.E80X
37.0-Iossifov2012 E
Iossifov2014 E
Ji2016 E
Kosmicki2017 E
Krupp2017 E
Satterstrom2020 E
Wilfert2021 G
Willsey2013 E
SCUBE2     Uddin2014:4chr11:
9111272-9111272
CAexonicDe novostopgainNM_001170690
NM_020974
c.G238T
c.G238T
p.E80X
p.E80X
37.0-Uddin2014 E
SCUBE2     11421.p1chr11:
9072167-9072167
CTexonicDe novononsynonymous SNVNM_020974c.G1625Ap.R542Q13.58-Iossifov2014 E
Ji2016 E
Kosmicki2017 E
Satterstrom2020 E
SCUBE2     SSC08194chr11:
9111272-9111272
CAexonicDe novostopgainNM_001170690
NM_020974
c.G238T
c.G238T
p.E80X
p.E80X
37.0-Lim2017 E
SCUBE2     SSC02463chr11:
9072167-9072167
CTexonicDe novononsynonymous SNVNM_020974c.G1625Ap.R542Q13.58-Lim2017 E
Source Variant Information

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Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
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