Variant Results

or

Results for "CLCNKB"

Variant Events: 11

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

CLCNKB

13062.p1

chr1:
16374867-16374867

G

C

exonic

De novo

nonsynonymous SNV

NM_000085

c.G528C

p.M176I

5.89

8.267E-6

Iossifov2014 E
Kosmicki2017 E
Lim2017 E
Satterstrom2020 E
Trost2022 G
Zhou2022 GE

CLCNKB

SP0020563

chr1:
16378853-16378853

C

G

exonic

De novo

synonymous SNV

NM_001165945
NM_000085

c.C1062G
c.C1569G

p.T354T
p.T523T

-

Fu2022 E
Trost2022 G
Zhou2022 GE

CLCNKB

SP0045094

chr1:
16374828-16374828

C

T

intronic

De novo

-

8.346E-6

Fu2022 E
Trost2022 G

CLCNKB

13062_p1

chr1:
16374867-16374867

G

C

exonic

De novo

nonsynonymous SNV

NM_000085

c.G528C

p.M176I

5.89

8.267E-6

Fu2022 E

CLCNKB

13346.p1

chr1:
16374437-16374437

T

G

exonic

De novo

synonymous SNV

NM_000085

c.T396G

p.G132G

-

Satterstrom2020 E

CLCNKB

1-0190-003

chr1:
16373354-16373354

C

T

intronic

De novo

-

Yuen2017 G

CLCNKB

5920

chr1:
16374437-16374437

T

G

exonic

De novo

synonymous SNV

NM_000085

c.T396G

p.G132G

-

Trost2022 G

CLCNKB

08C77684

chr1:
16375706-16375706

G

A

exonic

De novo

nonsynonymous SNV

NM_001165945
NM_000085

c.G240A
c.G747A

p.M80I
p.M249I

0.685

1.0E-4

DeRubeis2014 E
Fu2022 E
Kosmicki2017 E
Zhou2022 GE

CLCNKB

2-1342-003

chr1:
16376358-16376358

C

G

exonic

De novo

nonsynonymous SNV

NM_001165945
NM_000085

c.C408G
c.C915G

p.I136M
p.I305M

9.328

-

Jiang2013 G
Trost2022 G
Yuen2016 G
Yuen2017 G
Zhou2022 GE

CLCNKB

1-0295-003

chr1:
16381070-16381070

G

A

intronic

De novo

-

Trost2022 G
Yuen2017 G

CLCNKB

SP0197637

chr1:
16383395-16383395

C

T

exonic

De novo

nonsynonymous SNV

NM_001165945
NM_000085

c.C1538T
c.C2048T

p.P513L
p.P683L

15.52

1.691E-5

Trost2022 G
Trost2022 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
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