Variant Results

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Results for "NECAP2"

Variant Events: 3

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported
NECAP2	P1153	chr1: 16778330-16778330	T	C	intronic		De novo					-	-	Hashimoto2016 E
NECAP2	Codina-Sola2015:ASD_35	chr1: 16775637-16775637	C	T	exonic		Maternal	stopgain	NM_001145277 NM_001145278 NM_018090	c.C430T c.C352T c.C430T	p.Q144X p.Q118X p.Q144X	28.6	9.627E-6	Codina-Sola2015 E
NECAP2	MSSNG00227-003	chr1: 16767283-16767283	G	T	exonic		De novo	synonymous SNV	NM_001145277 NM_018090	c.G27T c.G27T	p.V9V p.V9V	-	-	Trost2022 G Zhou2022 GE

Source Variant Information

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Paper Information

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Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
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