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Results for "CCR5"

Variant Events: 5

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
CCR5     Shi2013:2chr3:
46414709-46414709
GAexonicInheritednonsynonymous SNVNM_000579
NM_001100168
c.G316A
c.G316A
p.G106R
p.G106R
18.274.0E-4Shi2013 G
CCR5     Shi2013:1chr3:
46414709-46414709
GAexonicInheritednonsynonymous SNVNM_000579
NM_001100168
c.G316A
c.G316A
p.G106R
p.G106R
18.274.0E-4Shi2013 G
CCR5     mAGRE5618chr3:
46414443-46414443
CAexonicPaternalstopgainNM_000579
NM_001100168
c.C50A
c.C50A
p.S17X
p.S17X
17.252.0E-4Cirnigliaro2023 G
CCR5     mAGRE4295chr3:
46414443-46414443
CAexonicPaternalstopgainNM_000579
NM_001100168
c.C50A
c.C50A
p.S17X
p.S17X
17.252.0E-4Cirnigliaro2023 G
CCR5     Cukier2014:17122chr3:
46414557-46414557
TAexonicUnknownnonsynonymous SNVNM_000579
NM_001100168
c.T164A
c.T164A
p.L55Q
p.L55Q
16.50.0127Cukier2014 E
Source Variant Information

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Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
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