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Results for "PCDHGA10"

Variant Events: 11

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
PCDHGA10     iHART3298chr5:
140795044-140795048
CGAAACexonicMaternalframeshift deletionNM_018913
NM_032090
c.2303_2306del
c.2303_2306del
p.R768fs
p.R768fs
-1.649E-5Ruzzo2019 G
PCDHGA10     AU4235303chr5:
140795044-140795048
CGAAACexonicMaternalframeshift deletionNM_018913
NM_032090
c.2303_2306del
c.2303_2306del
p.R768fs
p.R768fs
-1.649E-5Cirnigliaro2023 G
PCDHGA10     AU4235302chr5:
140795044-140795048
CGAAACexonicMaternalframeshift deletionNM_018913
NM_032090
c.2303_2306del
c.2303_2306del
p.R768fs
p.R768fs
-1.649E-5Cirnigliaro2023 G
PCDHGA10     AU4235301chr5:
140795044-140795048
CGAAACexonicMaternalframeshift deletionNM_018913
NM_032090
c.2303_2306del
c.2303_2306del
p.R768fs
p.R768fs
-1.649E-5Cirnigliaro2023 G
PCDHGA10     mAGRE4970chr5:
140794065-140794065
CCTexonicMaternalframeshift insertionNM_018913
NM_032090
c.1324dupT
c.1324dupT
p.H441fs
p.H441fs
-2.485E-5Cirnigliaro2023 G
PCDHGA10     mAGRE4908chr5:
140794065-140794065
CCTexonicMaternalframeshift insertionNM_018913
NM_032090
c.1324dupT
c.1324dupT
p.H441fs
p.H441fs
-2.485E-5Cirnigliaro2023 G
PCDHGA10     11086.p1chr5:
140793273-140793273
CTexonicsynonymous SNVNM_018913
NM_032090
c.C531T
c.C531T
p.S177S
p.S177S
--Zhou2022 GE
PCDHGA10     80001102321chr5:
140795019-140795019
CGexonicDe novononsynonymous SNVNM_018913
NM_032090
c.C2277G
c.C2277G
p.H759Q
p.H759Q
15.07-Fu2022 E
Lim2017 E
Satterstrom2020 E
Trost2022 G
Zhou2022 GE
PCDHGA10     2-1169-003chr5:
140794088-140794088
TGexonicDe novononsynonymous SNVNM_018913
NM_032090
c.T1346G
c.T1346G
p.I449S
p.I449S
12.91-Trost2022 G
Yuen2015 G
Yuen2017 G
Zhou2022 GE
PCDHGA10     iHART3300chr5:
140795044-140795048
CGAAACexonicMaternalframeshift deletionNM_018913
NM_032090
c.2303_2306del
c.2303_2306del
p.R768fs
p.R768fs
-1.649E-5Ruzzo2019 G
PCDHGA10     iHART3301chr5:
140795044-140795048
CGAAACexonicMaternalframeshift deletionNM_018913
NM_032090
c.2303_2306del
c.2303_2306del
p.R768fs
p.R768fs
-1.649E-5Ruzzo2019 G
Source Variant Information

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Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
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