Variant Results

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Results for "GGT1"

Variant Events: 6

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported
GGT1	AU3712302	chr22: 24992481-24992481	T	G	intronic		De novo					-	-	Trost2022 G Yuen2017 G
GGT1	1-0672-003	chr22: 25016995-25016995	G	A	exonic			nonsynonymous SNV	NM_001288833 NM_013430 NM_013421	c.G691A c.G691A c.G691A	p.G231S p.G231S p.G231S	29.2	-	Zhou2022 GE
GGT1	12175.p1	chr22: 25024161-25024161	G	A	splicing		De novo	splicing				11.69	8.239E-6	Ji2016 E Turner2017 G
GGT1	065-06-105547	chr22: 25019753-25019753	A	G	exonic		De novo	nonsynonymous SNV	NM_001288833 NM_013430 NM_013421	c.A890G c.A890G c.A890G	p.N297S p.N297S p.N297S	13.89	-	Fu2022 E Satterstrom2020 E Trost2022 G Zhou2022 GE
GGT1	12175.p1	chr22: 25024173-25024173	C	G	intronic		De novo					0.024	9.892E-5	Krumm2015 E
GGT1	5-0100-003	chr22: 24992804-24992804	C	T	intronic		De novo					-	-	Trost2022 G

Source Variant Information

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Paper Information

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Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
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