Variant Results

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Results for "NLN"

Variant Events: 10

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported
NLN	AU4483301	chr5: 65142680-65142680	T	C	intergenic		De novo					-	-	Yuen2017 G
NLN	2-0045-003	chr5: 65152701-65152701	A	G	intergenic		De novo					-	-	Yuen2016 G Yuen2017 G
NLN	2-1567-004	chr5: 65069462-65069462	G	A	intronic		De novo					-	-	Yuen2017 G
NLN	SP0088006	chr5: 65084034-65084034	T	C	exonic		De novo	nonsynonymous SNV	NM_020726	c.T1048C	p.F350L	4.836	-	Fu2022 E
NLN	7-0080-003	chr5: 65149440-65149459	TTTCCTTCCTTCCTTCCTTC	TTTCCTTCCTTCCTTC	intergenic		De novo					-	-	Yuen2017 G
NLN	Shi2013:2	chr5: 65088405-65088405	C	T	exonic		Inherited	nonsynonymous SNV	NM_020726	c.C1450T	p.P484S	28.4	4.942E-5	Shi2013 G
NLN	Shi2013:1	chr5: 65088405-65088405	C	T	exonic		Inherited	nonsynonymous SNV	NM_020726	c.C1450T	p.P484S	28.4	4.942E-5	Shi2013 G
NLN	2-1244-003	chr5: 65200305-65200305	G	A	intergenic		De novo					-	-	Yuen2016 G Yuen2017 G
NLN	2-0003-003	chr5: 65078695-65078695	C	T	intronic		De novo					-	-	Yuen2017 G
NLN	iHART2541	chr5: 65073257-65073258	AC	A	exonic		Maternal	frameshift deletion	NM_020726	c.455delC	p.T152fs	-	8.243E-6	Ruzzo2019 G

Source Variant Information

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Paper Information

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Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
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