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Results for "CDH9"

Variant Events: 31

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
CDH9     AU2000305chr5:
26989870-26989870
ACintronicDe novo--Yuen2017 G
CDH9     2-1629-003chr5:
27101880-27101884
CAGAGCAGintergenicDe novo--Yuen2017 G
CDH9     2-1741-003chr5:
27092913-27092913
CTintergenicDe novo--Yuen2017 G
CDH9     5-0140-003chr5:
27015305-27015306
ACAintronicDe novo--Yuen2017 G
CDH9     AU4237301chr5:
27087983-27087983
TGintergenicDe novo--Yuen2017 G
CDH9     5-0004-003chr5:
26893234-26893239
TTAATCTintronicDe novo--Yuen2017 G
CDH9     AU065807chr5:
26908768-26908768
GTintronicDe novo--Yuen2017 G
CDH9     3-0434-000chr5:
27276400-27276400
TCintergenicDe novo--Yuen2016 G
Yuen2017 G
CDH9     1-0253-005chr5:
27251032-27251035
AGGTAintergenicDe novo--Yuen2017 G
CDH9     1-0489-003chr5:
27240379-27240379
AGintergenicDe novo--Yuen2016 G
Yuen2017 G
CDH9     2-1719-003chr5:
27134798-27134798
GTintergenicDe novo--Yuen2017 G
CDH9     2-1235-004chr5:
27237549-27237549
TCintergenicDe novo--Yuen2017 G
CDH9     2-0503-003chr5:
27073332-27073332
GAintergenicDe novo--Yuen2017 G
CDH9     2-1735-003chr5:
26946171-26946171
TAintronicDe novo--Yuen2017 G
CDH9     1-0113-003chr5:
26900853-26900853
TGintronicDe novo--Yuen2016 G
CDH9     AU2162302chr5:
27175435-27175435
CTintergenicDe novo--Yuen2017 G
CDH9     2-0300-004chr5:
27069467-27069467
CTintergenicDe novo--Yuen2017 G
CDH9     14642.p1chr5:
26884240-26884240
TCintronicDe novo--Turner2016 G
CDH9     AU2495302chr5:
26896649-26896649
CAintronicDe novo--Yuen2017 G
CDH9     1-1004-003chr5:
27322840-27322840
AGintergenicDe novo--Yuen2017 G
CDH9     AU1223303chr5:
27258004-27258004
TCintergenicDe novo--Yuen2017 G
CDH9     1-0325-003chr5:
27212028-27212028
GTintergenicDe novo--Yuen2017 G
CDH9     5-0055-004chr5:
26934107-26934107
ATintronicDe novo--Yuen2017 G
CDH9     1-0007-003chr5:
27426673-27426673
GAintergenicDe novo--Yuen2017 G
CDH9     Cukier2014:17351chr5:
26885797-26885797
TCexonicUnknownnonsynonymous SNVNM_016279c.A1808Gp.E603G20.20.0069Cukier2014 E
CDH9     AU4159302chr5:
26909163-26909163
CTintronicDe novo--Yuen2017 G
CDH9     5-0074-003chr5:
27204981-27204981
CTintergenicDe novo--Yuen2017 G
CDH9     2-0503-004chr5:
27073332-27073332
GAintergenicDe novo--Yuen2017 G
CDH9     2-0102-004chr5:
27038862-27038862
GAupstreamDe novo--Yuen2017 G
CDH9     5-0114-003chr5:
27291288-27291288
TCintergenicDe novo--Yuen2017 G
CDH9     AU3937301chr5:
27439224-27439224
CTintergenicDe novo--Yuen2017 G
Source Variant Information

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Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
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