Variant Results

or

or

Results for "OR10J3"

Variant Events: 10

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported
OR10J3	AU0039303	chr1: 159374186-159374191	TCACAC	TCAC	intergenic		De novo					-	-	Yuen2017 G
OR10J3	14224.p1	chr1: 159283723-159283723	C	T	exonic		De novo	nonsynonymous SNV	NM_001004467	c.G727A	p.A243T	15.12	3.297E-5	Iossifov2014 E Ji2016 E Kosmicki2017 E Krupp2017 E Satterstrom2020 E Wilfert2021 G
OR10J3	Lim2017:31780	chr1: 159283723-159283723	C	T	exonic		De novo	nonsynonymous SNV	NM_001004467	c.G727A	p.A243T	15.12	3.297E-5	Lim2017 E
OR10J3	1-0552-004	chr1: 159376658-159376658	C	A	intergenic		De novo					-	-	Trost2022 G
OR10J3	31780	chr1: 159283723-159283723	C	T	exonic		De novo	nonsynonymous SNV	NM_001004467	c.G727A	p.A243T	15.12	3.297E-5	Fu2022 E Trost2022 G
OR10J3	MSSNG00127-003	chr1: 159374344-159374344	T	C	intergenic		De novo					-	-	Trost2022 G
OR10J3	2-1094-005	chr1: 159310920-159310922	CCT	C	intergenic		De novo					-	-	Yuen2017 G
OR10J3	AU045514	chr1: 159368458-159368458	A	G	intergenic		De novo					-	-	Yuen2017 G
OR10J3	2-1242-003	chr1: 159302340-159302340	T	C	intergenic		De novo					-	-	Yuen2016 G Yuen2017 G
OR10J3	AU038204	chr1: 159390759-159390759	C	A	intergenic		De novo					-	-	Trost2022 G Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
	More