Variant Results

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Results for "CCT4"

Variant Events: 5

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported
CCT4	SSC00098	chr2: 62115545-62115545	A	G	exonic		De novo	nonsynonymous SNV	NM_001256721 NM_006430	c.T98C c.T98C	p.I33T p.I33T	26.6	-	Fu2022 E Lim2017 E Trost2022 G
CCT4	SP0043905	chr2: 62095832-62095832	G	A	exonic			stopgain	NM_001256721 NM_006430	c.C1525T c.C1615T	p.R509X p.R539X	39.0	1.65E-5	Antaki2022 GE
CCT4	4-0064-004	chr2: 62102942-62102942	G	A	intronic		De novo					-	-	Trost2022 G
CCT4	11368.p1	chr2: 62104555-62104555	C	G	exonic		De novo	nonsynonymous SNV	NM_001256721 NM_006430	c.G527C c.G617C	p.R176T p.R206T	16.51	-	Iossifov2014 E Ji2016 E Kosmicki2017 E Lim2017 E Wilfert2021 G Zhou2022 GE
CCT4	11349.p1	chr2: 62115545-62115545	A	G	exonic		De novo	nonsynonymous SNV	NM_001256721 NM_006430	c.T98C c.T98C	p.I33T p.I33T	26.6	-	Iossifov2014 E Ji2016 E Kosmicki2017 E Satterstrom2020 E Wilfert2021 G Zhou2022 GE

Source Variant Information

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Paper Information

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Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
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