Variant Results

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Results for "GAP43"

Variant Events: 9

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported
GAP43	2-0202-003	chr3: 115495605-115495605	C	A	intergenic		De novo					-	-	Yuen2017 G
GAP43	AU4243302	chr3: 115480094-115480094	T	A	intergenic		De novo					-	-	Yuen2017 G
GAP43	MSSNG00128-003	chr3: 115386068-115386068	G	A	intronic		De novo					-	-	Trost2022 G
GAP43	mAGRE5523	chr3: 115382716-115382716	C	T	exonic		Paternal	stopgain	NM_001130064	c.C91T	p.R31X	36.0	-	Cirnigliaro2023 G
GAP43	mAGRE5522	chr3: 115382716-115382716	C	T	exonic		Paternal	stopgain	NM_001130064	c.C91T	p.R31X	36.0	-	Cirnigliaro2023 G
GAP43	15.s1	chr3: 115350078-115350078	T	TTGTTT	intronic		De novo					-	-	An2014 E
GAP43	1-0674-004	chr3: 115461893-115461893	C	T	intergenic		De novo					-	-	Yuen2017 G
GAP43	Codina-Sola2015:ASD_14	chr3: 115395293-115395293	A	C	exonic		Paternal	nonsynonymous SNV	NM_002045 NM_001130064	c.A464C c.A572C	p.K155T p.K191T	23.9	-	Codina-Sola2015 E
GAP43	5-5154-003	chr3: 115437018-115437018	T	C	intronic		De novo					-	-	Trost2022 G

Source Variant Information

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Paper Information

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Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
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