Variant Results

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Results for "LINC01446"

Variant Events: 26

Gene Gene symbol on which the variant is located	ID Subject Identifier from the original study	Location Genomic location of the reference allele	REF Reference allele	ALT Alternate allele	Context Variant functional categories	Variant validation performed by an orthogonal method and reported	Inheritance Reported inheritance status	Effects Variant effect on transcript per Annovar	Transcript Transcript used for the cDNA/Protein mutation	cDNA cDNA variant notation	Protein Protein variant notation	CADD-Phred v1.0 CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores	ExAC v0.3 ExAC population frequency (version 0.3)	Sources Source(s) where variants from this event are reported

LINC01446

2-1370-003

chr7:
54096977-54096977

C

G

intergenic

De novo

-

-

Yuen2016 G
Yuen2017 G

LINC01446

3-0392-000

chr7:
53980837-53980837

A

G

intergenic

De novo

-

-

Yuen2016 G

LINC01446

14642.p1

chr7:
53815312-53815312

A

C

ncRNA_intronic

De novo

-

-

Turner2016 G

LINC01446

14496.p1

chr7:
54058369-54058369

G

A

intergenic

De novo

-

-

Turner2016 G

LINC01446

2-1361-003

chr7:
53930813-53930813

C

T

intergenic

De novo

-

-

Yuen2016 G
Yuen2017 G

LINC01446

1-0464-003

chr7:
53819931-53819931

T

C

ncRNA_intronic

De novo

-

-

Yuen2016 G
Yuen2017 G

LINC01446

1-0383-003

chr7:
53821111-53821126

TTCTCTCTCTCTCTCT

TTCTCTCTCTCTCT

ncRNA_intronic

De novo

-

-

Yuen2017 G

LINC01446

2-1131-003

chr7:
53779625-53779625

G

C

ncRNA_intronic

De novo

-

-

Yuen2016 G
Yuen2017 G

LINC01446

3-0436-000

chr7:
53908508-53908508

T

C

intergenic

De novo

-

-

Yuen2016 G
Yuen2017 G

LINC01446

AU3857301

chr7:
54251968-54251968

G

A

intergenic

De novo

-

-

Yuen2017 G

LINC01446

2-1303-003

chr7:
53844826-53844826

C

G

ncRNA_intronic

De novo

-

-

Yuen2016 G
Yuen2017 G

LINC01446

AU2410302

chr7:
53988348-53988348

T

C

intergenic

De novo

-

-

Yuen2017 G

LINC01446

AU3649304

chr7:
54107880-54107880

C

A

intergenic

De novo

-

-

Yuen2017 G

LINC01446

AU4237302

chr7:
54252009-54252009

G

T

intergenic

De novo

-

-

Yuen2017 G

LINC01446

2-1107-003

chr7:
54104616-54104616

A

G

intergenic

De novo

-

-

Yuen2017 G

LINC01446

AU2139301

chr7:
54148031-54148031

C

T

intergenic

De novo

-

-

Yuen2017 G

LINC01446

AU3586303

chr7:
53796046-53796046

G

A

ncRNA_intronic

De novo

-

-

Yuen2017 G

LINC01446

AU4197301

chr7:
54033585-54033585

T

G

intergenic

De novo

-

-

Yuen2017 G

LINC01446

1-0448-003

chr7:
54183381-54183381

G

C

intergenic

De novo

-

-

Yuen2017 G

LINC01446

1-0448-003

chr7:
54179406-54179406

T

C

intergenic

De novo

-

-

Yuen2017 G

LINC01446

2-1185-003

chr7:
53839876-53839876

T

G

ncRNA_intronic

De novo

-

-

Yuen2017 G

LINC01446

AU2569301

chr7:
53950981-53950981

T

C

intergenic

De novo

-

-

Yuen2017 G

LINC01446

AU3605303

chr7:
54010970-54010970

T

G

intergenic

De novo

-

-

Yuen2017 G

LINC01446

1-0467-005

chr7:
54056885-54056885

G

A

intergenic

De novo

-

-

Yuen2017 G

LINC01446

1-0513-003

chr7:
53857188-53857190

AGG

AG

ncRNA_intronic

De novo

-

-

Yuen2017 G

LINC01446

2-1506-003

chr7:
54115132-54115132

T

C

intergenic

De novo

-

-

Yuen2017 G

Source Variant Information

, -

Source:

Paper alias:

No records found.

Paper Information

Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count	The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notes	View
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