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Results for "PCLO"

Variant Events: 112

Gene
Gene symbol on which the variant is located
ID
Subject Identifier from the original study
Location
Genomic location of the reference allele
REF
Reference allele
ALT
Alternate allele
Context
Variant functional categories
Variant validation performed by an orthogonal method and reported
Inheritance
Reported inheritance status
Effects
Variant effect on transcript per Annovar
Transcript
Transcript used for the cDNA/Protein mutation
cDNA
cDNA variant notation
Protein
Protein variant notation
CADD-Phred v1.0
CADD phred-like score. This is phred-like rank score based on whole genome CADD raw scores
ExAC v0.3
ExAC population frequency (version 0.3)
Sources
Source(s) where variants from this event are reported
PCLO     3-0393-000chr7:
82584377-82584377
CTexonicDe novosynonymous SNVNM_014510
NM_033026
c.G5892A
c.G5892A
p.T1964T
p.T1964T
-4.151E-5Tammimies2015 E
Trost2022 G
Zhou2022 GE
PCLO     1-0402-004chr7:
82737028-82737028
TTGGCCintronicDe novo--Yuen2017 G
PCLO     AU3702307chr7:
82423390-82423390
TCintronicDe novo--Trost2022 G
Yuen2017 G
PCLO     PN400587chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     1-0412-003chr7:
82838121-82838121
ACintergenicDe novo--Yuen2017 G
PCLO     2-1729-003chr7:
82853508-82853508
CTintergenicDe novo--Yuen2017 G
PCLO     72-0745chr7:
82763882-82763882
GAexonicInheritednonsynonymous SNVNM_014510
NM_033026
c.C2984T
c.C2984T
p.P995L
p.P995L
5.713-Patowary2019 E
PCLO     1-0368-004chr7:
82727956-82727956
TCintronicDe novo--Trost2022 G
Yuen2017 G
PCLO     AU2139301chr7:
82408973-82408973
GTintronicDe novo--Trost2022 G
Yuen2017 G
PCLO     2-1364-003chr7:
82658995-82658995
TCintronicDe novo--Yuen2017 G
PCLO     80001101063chr7:
82579998-82579998
CTexonicDe novosynonymous SNVNM_014510
NM_033026
c.G9906A
c.G9906A
p.Q3302Q
p.Q3302Q
-8.282E-6Fu2022 E
Satterstrom2020 E
Trost2022 G
Zhou2022 GE
PCLO     1-0567-003chr7:
82429943-82429943
CGintronicDe novo--Yuen2017 G
PCLO     2-1440-003chr7:
82489958-82489958
TCintronicDe novo--Trost2022 G
Yuen2017 G
PCLO     PN400590chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     PN400386chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     PN400127chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     More2023:11chr7:
82584378-82584378
GAexonicInheritednonsynonymous SNVNM_014510
NM_033026
c.C5891T
c.C5891T
p.T1964M
p.T1964M
0.0295.0E-4More2023 G
PCLO     AU2235301chr7:
82544917-82544917
TCexonicnonsynonymous SNVNM_014510
NM_033026
c.A12385G
c.A12385G
p.K4129E
p.K4129E
18.36-Zhou2022 GE
PCLO     3-0306-001chr7:
82453709-82453709
TAexonicsynonymous SNVNM_014510
NM_033026
c.A14439T
c.A14439T
p.T4813T
p.T4813T
--Zhou2022 GE
PCLO     PN400178chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     2-1429-003chr7:
82542330-82542330
ATintronicDe novo--Yuen2017 G
PCLO     1-0010-003chr7:
82429943-82429943
CGintronicDe novo--Yuen2017 G
PCLO     08C72695chr7:
82544917-82544917
TCexonicDe novononsynonymous SNVNM_014510
NM_033026
c.A12385G
c.A12385G
p.K4129E
p.K4129E
18.36-Fu2022 E
Satterstrom2020 E
Trost2022 G
Zhou2022 GE
PCLO     5-0015-004chr7:
82836603-82836603
CTintergenicDe novo--Yuen2017 G
PCLO     AU1742302 Complex Event; expand row to view variants  De novo--Trost2022 G
Yuen2017 G
PCLO     AU4237304chr7:
82691548-82691548
GTintronicDe novo--Trost2022 G
Yuen2017 G
PCLO     2-0278-003chr7:
82825330-82825330
TCintergenicDe novo--Yuen2017 G
PCLO     AU3692301chr7:
82901907-82901907
GAintergenicDe novo--Yuen2017 G
PCLO     2-0242-003chr7:
82960839-82960839
GTintergenicDe novo--Yuen2017 G
PCLO     ASP045chr7:
82544191-82544191
TCexonicDe novononsynonymous SNVNM_014510
NM_033026
c.A13111G
c.A13111G
p.M4371V
p.M4371V
8.8078.314E-6Fu2022 E
Satterstrom2020 E
Trost2022 G
Zhou2022 GE
PCLO     PN400231chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     SP0254522chr7:
82545810-82545810
CTexonicnonsynonymous SNVNM_014510
NM_033026
c.G11492A
c.G11492A
p.R3831H
p.R3831H
20.4-Zhou2022 GE
PCLO     SP0100403chr7:
82785330-82785330
AAGexonicframeshift insertionNM_014510
NM_033026
c.626dupC
c.626dupC
p.P209fs
p.P209fs
--Zhou2022 GE
PCLO     5-0065-003chr7:
82430109-82430109
GAintronicDe novo--Yuen2017 G
PCLO     SP0223747chr7:
82584914-82584914
TAexonicnonsynonymous SNVNM_014510
NM_033026
c.A5355T
c.A5355T
p.L1785F
p.L1785F
6.049-Zhou2022 GE
PCLO     PN400490chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     7-0106-003chr7:
82872794-82872795
CTCintergenicDe novo--Yuen2017 G
PCLO     AU4152303chr7:
82424202-82424202
TCintronicDe novo--Trost2022 G
Yuen2017 G
PCLO     PN400504chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     2-0070-003chr7:
82430599-82430599
CTintronicDe novo--Trost2022 G
Yuen2017 G
PCLO     AU4159301chr7:
82795386-82795386
GTintergenicDe novo--Yuen2017 G
PCLO     PN400393chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     7-0102-003chr7:
82526914-82526914
TCintronicDe novo--Trost2022 G
Yuen2017 G
PCLO     SP0081088chr7:
82508599-82508599
GTintronicDe novo--Fu2022 E
PCLO     SP0042412chr7:
82545804-82545804
TGexonicDe novononsynonymous SNVNM_014510
NM_033026
c.A11498C
c.A11498C
p.Y3833S
p.Y3833S
16.92-Fu2022 E
Trost2022 G
Zhou2022 GE
PCLO     SP0062234chr7:
82784423-82784423
GAexonicDe novostopgainNM_014510
NM_033026
c.C1534T
c.C1534T
p.Q512X
p.Q512X
38.0-Fu2022 E
Trost2022 G
Zhou2022 GE
PCLO     SP0032696chr7:
82538248-82538248
CTexonicDe novononsynonymous SNVNM_014510
NM_033026
c.G13382A
c.G13382A
p.R4461Q
p.R4461Q
16.438.313E-6Fu2022 E
Trost2022 G
Zhou2022 GE
PCLO     SP0102620chr7:
82545390-82545390
TAexonicDe novononsynonymous SNVNM_014510
NM_033026
c.A11912T
c.A11912T
p.E3971V
p.E3971V
17.97-Fu2022 E
Trost2022 G
Zhou2022 GE
PCLO     2-1272-003chr7:
82771808-82771808
TAintronicDe novo--Yuen2016 G
PCLO     PN400125chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     1-0395-003chr7:
82430143-82430143
TCintronicDe novo--Yuen2017 G
PCLO     AU4215302chr7:
82906018-82906018
TGintergenicDe novo--Yuen2017 G
PCLO     12449.p1chr7:
82887288-82887288
TCintergenicDe novo--Turner2016 G
PCLO     AU4246304chr7:
82525931-82525931
CTintronicDe novo--Trost2022 G
Yuen2017 G
PCLO     A26chr7:
82911990-82911990
TTTGintergenicDe novo--Wu2018 G
PCLO     2-0286-004chr7:
82937926-82937926
CTintergenicDe novo--Yuen2017 G
PCLO     1-0253-004chr7:
82429997-82429997
TCintronicDe novo--Trost2022 G
PCLO     1-0253-004chr7:
82430004-82430004
TCintronicDe novo--Trost2022 G
PCLO     1-0253-004chr7:
82429985-82429985
TCintronicDe novo--Trost2022 G
PCLO     1-0253-004chr7:
82429993-82429993
AGintronicDe novo--Trost2022 G
PCLO     5-0512-005chr7:
82416651-82416651
CAintronicDe novo--Trost2022 G
PCLO     2-1089-003chr7:
82914766-82914766
ATintergenicDe novo--Yuen2017 G
PCLO     PN400240chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     1-0253-004chr7:
82429980-82429980
GCintronicDe novo--Trost2022 G
PCLO     PN400157chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     MSSNG00255-003chr7:
82401606-82401606
CTintronicDe novo--Trost2022 G
PCLO     2-1366-003chr7:
82430059-82430060
GTCCintronicDe novo--Trost2022 G
PCLO     2-0088-003chr7:
82430059-82430060
GTCCintronicDe novo--Trost2022 G
PCLO     2-0088-003chr7:
82430056-82430056
TCintronicDe novo--Trost2022 G
PCLO     7-0100-004chr7:
82430059-82430060
GTCCintronicDe novo--Trost2022 G
PCLO     1-0253-004chr7:
82430015-82430015
ACintronicDe novo--Trost2022 G
PCLO     7-0100-004chr7:
82430056-82430056
TCintronicDe novo--Trost2022 G
PCLO     1-0253-004chr7:
82430007-82430007
AGintronicDe novo--Trost2022 G
PCLO     1-0253-004chr7:
82430012-82430012
ACintronicDe novo--Trost2022 G
PCLO     PN400396chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     5-0129-003chr7:
82430073-82430074
GTACGCCCGGintronicDe novo--Trost2022 G
PCLO     5-0009-003chr7:
82440017-82440017
TGintronicDe novo--Trost2022 G
PCLO     2-1366-003chr7:
82430070-82430074
ACTGTCCCGGintronicDe novo--Trost2022 G
PCLO     2-0088-003chr7:
82430070-82430074
ACTGTCCCGGintronicDe novo--Trost2022 G
PCLO     3-0058-000chr7:
82430066-82430066
CTintronicDe novo--Trost2022 G
PCLO     7-0100-004chr7:
82430070-82430074
ACTGTCCCGGintronicDe novo--Trost2022 G
PCLO     3-0058-000chr7:
82430059-82430060
GTCCintronicDe novo--Trost2022 G
PCLO     2-0088-003chr7:
82430066-82430066
CTintronicDe novo--Trost2022 G
PCLO     5-5101-003chr7:
82494782-82494782
CTintronicDe novo--Trost2022 G
PCLO     7-0017-003Achr7:
82495997-82495997
CCATintronicDe novo--Trost2022 G
PCLO     MSSNG00174-003chr7:
82480422-82480422
TCintronicDe novo--Trost2022 G
PCLO     REACH000696chr7:
82493738-82493738
GAintronicDe novo--Trost2022 G
PCLO     1-0944-003chr7:
82456761-82456761
AGintronicDe novo--Trost2022 G
PCLO     MT_58.3chr7:
82459139-82459139
GAintronicDe novo--Trost2022 G
PCLO     1-0368-004chr7:
82454673-82454673
ACintronicDe novo--Trost2022 G
PCLO     5-5171-003chr7:
82455044-82455044
TCintronicDe novo--Trost2022 G
PCLO     2-1763-003chr7:
82609923-82609923
CTintronicDe novo--Trost2022 G
PCLO     2-1806-003chr7:
82610918-82610918
TCintronicDe novo--Trost2022 G
PCLO     AU055603chr7:
82598698-82598698
GTintronicDe novo--Trost2022 G
PCLO     3-0374-000chr7:
82606639-82606640
CTCintronicDe novo--Trost2022 G
PCLO     1-1197-003chr7:
82536092-82536092
CTintronicDe novo--Trost2022 G
PCLO     PN400363chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     GM182936chr7:
82583913-82583913
GCexonicDe novononsynonymous SNVNM_014510
NM_033026
c.C6356G
c.C6356G
p.S2119W
p.S2119W
10.168.298E-6Fu2022 E
PCLO     1-1063-003chr7:
82539879-82539879
CTintronicDe novo--Trost2022 G
PCLO     2-0103-004chr7:
82532147-82532147
ATintronicDe novo--Trost2022 G
PCLO     1-1197-003chr7:
82536088-82536088
GTintronicDe novo--Trost2022 G
PCLO     1-0366-003chr7:
82532022-82532022
GTexonicDe novosynonymous SNVNM_014510
NM_033026
c.C13473A
c.C13473A
p.I4491I
p.I4491I
--Yuen2015 G
PCLO     PN400507chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     2-0103-004chr7:
82991648-82991648
GAintergenicDe novo--Trost2022 G
PCLO     JASD_Fam0158chr7:
82544191-82544191
TCexonicDe novononsynonymous SNVNM_014510
NM_033026
c.A13111G
c.A13111G
p.M4371V
p.M4371V
8.8078.314E-6Takata2018 E
PCLO     7-0438-003chr7:
82736326-82736326
GTintronicDe novo--Trost2022 G
PCLO     PN400241chr7:
82543843-82543845
CATCintronicUnknown-3.0E-4Leblond2019 E
PCLO     MSSNG00348-003chr7:
82765674-82765674
CAintronicDe novo--Trost2022 G
PCLO     5-5046-003chr7:
82627062-82627062
TAintronicDe novo--Trost2022 G
PCLO     2-1243-003chr7:
82679571-82679576
AACTAGCAAAAAintronicDe novo--Trost2022 G
PCLO     2-1261-003chr7:
82552100-82552103
GTTCGintronicDe novo--Trost2022 G
Yuen2017 G
PCLO     AU1635302chr7:
82664812-82664812
ACintronicDe novo--Trost2022 G
Yuen2017 G
Source Variant Information

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Source:

Paper alias:

No records found.
Paper Information
Title
Authors
Technology
Variant source
Cohorts
Design
URL
Pubmed
Subject count
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count
Curation notesView
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