Publication Details

Results for Cascio2019:

Title Abnormalities in the genes that encode Large Amino Acid Transporters increase the risk of Autism Spectrum Disorder
AuthorsCascio, L., Chen, C.-F., Pauly, R., Srikanth, S., Jones, K., Skinner, C.D., Stevenson, R.E., Schwartz, C.E., Boccuto, L.
TechnologyTargeted sequencing
Variant sourceTable 1,2, and 3
CohortsBoccuto et al., 2013
Subject count15
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count16
Curation notesView
Breakdown by exonic function
FunctionVariant Count
nonsynonymous SNV10
synonymous SNV3

What am I looking at?

Summary: Information from the literature piece (e.g. Author, Publisher, DOI) and the study experimental design (e.g. sample size, source of probands, sequencing technology.) For a full list of sources of variants, be sure to check out the publications page. Documentation and description of our work can be found on the help page.

Breakdown by exonic function: We annotated the variants with an effect prediction using ANNOVAR. The functions are categories of variants, such as frameshift variants (i.e. frameshift_elongation (SO:0001909)), loss/gain of stop codon, SNVs and non-frameshift variants. See the full list of possible annotations for exonic variants in the documentation.