Publication Details

Results for Turner2016:

Title Genome Sequencing of Autism-Affected Families Reveals Disruption of Putative Noncoding Regulatory DNA
AuthorsTurner, T.N., Hormozdiari, F., Duyzend, M.H., McClymont, S.A., Hook, P.W., Iossifov, I., Raja, A., Baker, C., Hoekzema, K., Stessman, H.A., Zody, M.C., Nelson, B.J., Huddleston, J., Sandstrom, R., Smith, J.D., Hanna, D., Swanson, J.M., Faustman, E.M., Bam
TechnologyWhole genome sequencing
Variant sourceTable S9. All de novo
CohortsSimons Simplex Collection
Subject count40
The number of subjects for this study could not be determined directly from the variant data; the value given is that reported by the authors in the publication.
Variant event count3790
Curation notesView
Breakdown by exonic function
FunctionVariant Count
nonframeshift deletion1
nonsynonymous SNV33
synonymous SNV19

What am I looking at?

Summary: Information from the literature piece (e.g. Author, Publisher, DOI) and the study experimental design (e.g. sample size, source of probands, sequencing technology.) For a full list of sources of variants, be sure to check out the publications page. Documentation and description of our work can be found on the help page.

Breakdown by exonic function: We annotated the variants with an effect prediction using ANNOVAR. The functions are categories of variants, such as frameshift variants (i.e. frameshift_elongation (SO:0001909)), loss/gain of stop codon, SNVs and non-frameshift variants. See the full list of possible annotations for exonic variants in the documentation.